Job Description P0A6V8 Confidence 100.00% Date Thu Jan 5 11:04:01 GMT 2012 Rank 12 Aligned Residues 278 % Identity 15% Template c2gupA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rok family protein; PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose Resolution 2.01 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.					.	80
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	V	K	D	G	C	I	A	I	A	C	P	I	T	G	D	W	V	A	M	T	N	H	T	.	.	.	.	W	A
Query Conservation																																																																												.	.	.	.
Alig confidence																																																	.	.																										.	.	.	.
Template Conservation																																																	.	.
Template Sequence		I	A	T	I	D	I	G	G	T	G	I	K	F	A	S	L	T	P	D	G	K	I	L	D	K	T	S	I	S	T	P	E	N	L	E	D	L	L	A	W	L	D	Q	R	L	S	E	.	.	Q	D	Y	S	G	I	A	X	S	V	P	G	A	V	N	Q	E	T	G	V	I	D	G	F	S	A	V	P	Y	I	H
Template Known Secondary structure									T	T									T	T													S	S													T	T	.	.	S			S							S	S				T	T	T		B			S			S	S	G	G	G	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	I	A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I	A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K	R	W	V	S	L	P	G	E	G	G	H
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	S	W	Y	E	A	L	S	S	Y	Q	L	P	V	H	L	E	N	D	A	N	C	V	G	L	S	E	.	.	.	.	.	.	.	.	.	.	L	L	A	H	P	E	L	E	N	A	A	C	V	V	I	G	T	G	I	G	G	A	X	I	I	N	G	R	L	H	R	G	R	H	G	L	G	G	E	F	G	Y
Template Known Secondary structure		S	S	B					T	G	G	G																		.	.	.	.	.	.	.	.	.	.					T	T		S	S							S	S	S								T	T						T	T	S		T	T		G	G	G
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	F	A	P	N	S	E	E	E	A	I	I	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L	V	N	L	Y	R	A	I	V	K	A	D	N	R	L	P	E	N	L	K	P	K	D	I	T	E	R	A	L	A	D	S	C	T	D	C	R	R	A	L	S	L	F	C	V	I
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		X	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	P	A	E	K	L	N	N	W	S	Q	L	A	S	T	G	N	X	V	R	Y	V	I	E	K	S	G	H	T	D	W	D	.	.	.	.	.	.	G	R	K	I	Y	Q	E	A	A	A	G	N	I	L	C	Q	E	A	I	E	R	X	N	R	N
Template Known Secondary structure			B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	S	S			B						S													S	S					.	.	.	.	.	.										T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		151	.	.														.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.							.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																.														.
Query SS confidence																																																.														.
Query Sequence		M	G	R	F	G	G	N	L	A	L	N	L	G	T	F	G	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A	S	G	F	R	A	A	F	E	D	K	G	R	.	F	K	E	Y	V	H	D	I	P	V	Y	L	I	.	V	H	D	N	P	G	L	L	G	S	G	A	H	L	R	Q	T	L
Query Conservation																																																.														.
Alig confidence																		.															.	.	.													.														.
Template Conservation																		.															.	.	.
Template Sequence		L	A	Q	G	L	L	N	I	Q	Y	L	I	D	P	G	V	.	I	S	L	G	G	S	I	S	Q	N	P	D	F	I	.	.	.	Q	G	V	K	K	A	V	E	D	F	V	D	A	Y	E	E	Y	T	V	A	P	V	I	Q	A	C	T	Y	H	A	D	A	N	L	Y	G	A	L	V	N	W	L	Q	E	E
Template Known Secondary structure																S		.					S	G	G	G	G						.	.	.															T	T			S								S		S	T	T														T
Template Predicted Secondary structure																		.															.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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