Job Description P0A6V8 Confidence 92.30% Date Thu Jan 5 11:04:01 GMT 2012 Rank 116 Aligned Residues 218 % Identity 14% Template c2f9tB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pantothenate kinase; PDBTitle: structure of the type iii coaa from pseudomonas aeruginosa Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	V	K	D	G	C	I	A	I	A	C	.	P	I	T	G	D	W	V	A	M	T	N	H	T	W	A	F	S	I
Query Conservation																																																															.
Alig confidence																																	.	.	.	.	.	.																									.							.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	L	D	C	G	N	S	L	I	K	W	R	V	I	E	G	A	A	R	S	V	A	G	G	L	A	E	S	D	.	.	.	.	.	.	D	A	L	V	E	Q	L	T	S	Q	Q	A	L	P	V	R	A	C	R	L	V	S	V	R	S	E	Q	E	T	S	Q	.	.	.	.	.	.	.	.	.	.	L	V
Template Known Secondary structure									S	S									T	T	T									S	S	S	.	.	.	.	.	.					T	T	T	T	S	S														S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.							.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.											.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.					.
Query SS confidence																							.	.	.	.					.
Query Sequence		A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	.	.	.	.	S	M	A	I	.	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I	A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K	R	W	V	S	L	P	G	E	G
Query Conservation																							.	.	.	.					.
Alig confidence																							.	.	.	.					.																																															.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	R	L	E	Q	L	F	P	V	S	A	L	V	A	S	S	G	K	Q	L	A	G	V	R	N	G	Y	L	D	Y	Q	R	L	G	L	D	R	W	L	A	L	V	A	A	H	H	L	A	K	K	A	C	L	V	I	D	L	G	T	A	V	T	S	D	L	V	A	A	D	G	V	H	L	G	G	Y	.	.	.	.
Template Known Secondary structure						T	T	S	S										S			T	T					S	S	S	G	G	G	S																S	S								S	S									T	T	S	B						.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		G	H	V	D	F	A	P	N	S	E	E	E	A	I	I	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L	V	N	L	Y	R	A	I	V	K	A	D	N	R	L	P	E	N	L	K	P	K	D	I	T	E	R	.	.	.	.	A	L	A	D	S	C	T	D	C	R	R	A	L
Query Conservation																																																																	.	.	.	.
Alig confidence		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	I	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	X	T	L	X	R	S	Q	L	R	T	H	T	R	R	I	R	Y	D	D	A	E	A	R	R	A	L	A	S	L	Q	P	G	Q	A	T	A	E	A	V	E	R	G	C	L
Template Known Secondary structure		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T												T	T			S			S	S
Template Predicted Secondary structure		.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						142	.	.																													.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	F	C	V	I	M	G	R	F	G	G	N	L	A	L	N	L	G	T	F	G	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	X	L	R	G	F	V	R	E	Q	Y	A	X	A	C	E	L	L	G	P	D	C	E	I	F	L	T	G	G	D	A	E	L	V	R	D	E	L	A	G
Template Known Secondary structure																			T		T	T							S	T	T	G	G	G	T	G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions