Job Description P0A6V8 Confidence 100.00% Date Thu Jan 5 11:04:01 GMT 2012 Rank 16 Aligned Residues 289 % Identity 13% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		M	T	K	Y	A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	.	.	.	.	.	.	.	.	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	.	.	.	.	V	K	D	G	C	I	A	I	A	C	P	I	T
Query Conservation																																								.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		M	A	A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	K	I	L	A	E	A	D	G	L	S	T	N	H	W	L	I	G	T	D	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	S	L	G	L	S	L	S	G	G	D	Q
Template Known Secondary structure		T	S										T	T									T	T	S																																					T			T	T			B	S							T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	W	V	A	M	T	N	H	T	W	A	F	S	I	A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I	A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D
Query Conservation
Alig confidence												.	.	.	.												.																.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.												.																.	.	.	.	.	.	.	.
Template Sequence		E	D	A	G	R	I	L	I	E	E	.	.	.	.	L	R	D	R	F	P	Y	L	S	E	S	.	Y	L	I	T	T	D	A	A	G	S	I	A	T	A	T	.	.	.	.	.	.	.	.	P	D	G	G	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G
Template Known Secondary structure												.	.	.	.						T	T	S	B	S		.																.	.	.	.	.	.	.	.	S	S								S	S	S								T	T	S
Template Predicted Secondary structure												.	.	.	.												.																.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.									.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
				149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.													.	.	.	210	.	.	.	.
Predicted Secondary structure		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	K	R	W	V	S	L	P	G	E	G	G	H	V	D	F	A	P	N	S	E	E	E	A	I	I	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L	V	N	L	Y	R	A	I	V	K	A	D	.	.	.	.	.	.	.	.	.	.	.	.	N	R	L	P	E	N	L	K
Query Conservation		.	.																																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	M	M	G	D	E	G	S	A	Y	W	I	A	H	Q	A	V	K	I	.	.	.	.	.	.	.	.	.	.	.	.	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G
Template Known Secondary structure		T	T	T			T	T	S												.	.	.	.	.	.	.	.	.	.	.	.							T	S	S			S	S														T		S	S									T	T	T								T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.													.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.								.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.
Query Sequence		P	K	D	I	T	E	R	A	L	A	D	S	C	T	D	C	R	R	A	L	S	L	F	C	V	I	M	G	R	F	G	G	N	L	A	L	N	L	G	T	F	G	.	.	.	.	.	.	.	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A	S	G	F	R	A	A	F	E	D	K	G	R	F
Query Conservation																																												.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.																.	.													.	.
Template Conservation																																																																		.	.													.	.
Template Sequence		F	C	R	K	I	A	E	G	A	Q	Q	G	D	P	L	S	R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	.	.	K	E	G	F	L	L	A	L	T	Q	G	R	.	.
Template Known Secondary structure		T										T	T																							G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G					.	.													.	.
Template Predicted Secondary structure																																																																		.	.													.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	Y	V	H	D	I	P	V	Y	L	I	V	H	D	N	P	G	L	L	G	S	G	A	H	L	R	Q	T	L	G	H	I	L
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	I	F	S	S	F	T	L	M	K	L	R	H	S	S	A	L	G	G	A	S	L	G	A	R	H	I	G	H	L	L
Template Known Secondary structure		.	.	.												S	S		T											T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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