Job Description P0A6V8 Confidence 100.00% Date Thu Jan 5 11:04:01 GMT 2012 Rank 4 Aligned Residues 297 % Identity 14% Template c1z6rC_ PDB info PDB header:transcription Chain: C: PDB Molecule:mlc protein; PDBTitle: crystal structure of mlc from escherichia coli Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.																	.	.	.
Query SS confidence																																						.	.	.	.	.																	.	.	.
Query Sequence		K	Y	A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	E	I	S	Q	A	K	T	Y	S	G	L	D	Y	.	.	.	.	.	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	.	.	.	E	V	K	D	G	C	I	A	I	A	C	P	I	T	G	D	W	V	A	M
Query Conservation																																						.	.	.	.	.																	.	.	.
Alig confidence																																						.	.	.	.	.																	.	.	.
Template Conservation
Template Sequence		W	H	Y	L	S	L	R	I	S	R	G	E	I	F	L	A	L	R	D	L	S	S	K	L	V	V	E	E	S	Q	E	L	A	L	K	D	D	L	P	L	L	D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T	E	N	G	I	V
Template Known Secondary structure											T	T									T	T													S	S		S	S																	T	T	T	T												S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		75	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		T	N	.	.	.	.	.	H	T	W	A	F	S	I	A	E	M	K	K	N	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I	A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.
Template Sequence		H	R	X	P	F	Y	E	D	V	K	E	X	P	L	G	E	A	L	E	Q	H	T	G	V	P	V	Y	I	Q	H	D	I	S	A	W	T	X	A	E	A	.	.	.	.	.	.	.	.	L	F	G	A	S	R	G	A	R	D	V	I	Q	V	V	I	D	H	N	V	G	A	G	V	I	T	D	G	H	L	L	H
Template Known Secondary structure					S	S		T	T		S	S	B												S																	.	.	.	.	.	.	.	.		T	S	T	T	T	T		S	S							S	S	S								T	T			T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		R	W	V	S	L	P	G	E	G	G	H	V	D	F	A	P	N	S	E	E	E	A	I	I	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L	V	N	L	Y	R	A	I	V	K	A	D	N	R	L	.	.	P	E	N	L	K	P	K	D	I	T	E	R	A	L	A	D	S	C
Query Conservation																																																														.	.
Alig confidence																					.	.	.	.	.	.	.	.																																		.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		A	G	S	S	S	L	V	E	I	G	H	T	Q	V	D	P	Y	G	K	.	.	.	.	.	.	.	.	R	C	Y	C	G	N	H	G	C	L	E	T	I	A	S	V	D	S	I	L	E	L	A	Q	L	R	L	N	Q	S	X	S	S	X	L	H	G	Q	P	L	T	V	D	S	L	C	Q	A	A	L	R	G	D
Template Known Secondary structure		T	T	S	S			B		G	G	G	S	B	S		T	T	S		.	.	.	.	.	.	.	.	B		T	T	S	S	B	S	B	T					S														T		S	S		G	G	G	G	S														T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		T	D	C	R	R	A	L	S	L	F	C	V	I	M	G	R	F	G	G	N	L	A	L	N	L	G	T	F	G	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A	S	G	F	R	A	A	F	E	D	K	G	R	F	K	E	Y	V	H	D	I	P	V	Y	L	I	.	V	H	D	N	P	G	L
Query Conservation																																																																										.
Alig confidence																															.																.	.											.															.
Template Conservation																															.																.	.											.
Template Sequence		L	L	A	K	D	I	I	T	G	V	G	A	H	V	G	R	I	L	A	I	X	V	N	L	F	N	P	Q	K	.	I	L	I	G	S	P	L	S	K	A	A	D	I	L	F	.	.	P	V	I	S	D	S	I	R	Q	Q	.	A	L	P	A	Y	S	Q	H	I	S	V	E	S	T	Q	F	S	N	Q	G	T	X
Template Known Secondary structure																													S		.					S	G	G	G	G	G						.	.											.	S						S	S							S	S				T	T	T
Template Predicted Secondary structure																															.																.	.											.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	S	G	A	H	L	R	Q	T	L	G	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	A	L	V	K	D	A	X	Y	N	G
Template Known Secondary structure		T												S
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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