 |
Job Description | P0A6V8 | Confidence | 97.72% | Date | Thu Jan 5 11:04:01 GMT 2012 |
Rank | 81 | Aligned Residues | 63 |
% Identity | 14% | Template | c1xupO_ |
PDB info |
PDB header:transferase | Chain: O: PDB Molecule:glycerol kinase; |
PDBTitle: enterococcus casseliflavus glycerol kinase complexed with glycerol
|
Resolution | 2.75 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | L | V | G | D | V | G | G | T | N | A | R | L | A | L | C | D | I | A | S | G | E | I | S | Q | A | K | T | Y | S | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | D | Y | P | S | L | E | A | V | I | R | V | Y | L | E | E | H | . |
. |
. |
. |
. |
. |
. |
K | V | E | V | K | D | G | C | I | A | I | A | C | P |
Query Conservation |   |
|   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|   |   |   |   |
Template Sequence |   |
Y | V | M | A | I | D | Q | G | T | T | S | S | R | A | I | I | F | D | R | N | G | K | K | I | G | S | S | Q | K | E | F | P | Q | Y | F | P | K | S | G | W | V | E | H | N | A | N | E | I | W | N | S | V | Q | S | V | I | A | G | A | F | I | E | S | G | I | R | P | E | A | I | A | G | I | G | I | T | N | Q | R | E |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S | S |
|  |  |
|
|  |  |
| S | S | S |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
| S | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| S | S |
|
|
|
| T | T | T |
|
|
|
|  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|