Job Description P0A6V8 Confidence 99.41% Date Thu Jan 5 11:04:01 GMT 2012 Rank 48 Aligned Residues 286 % Identity 17% Template c1v4sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence																							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	.	.	.	.	.	.	E	I	S	Q	A	K	T	Y	S	G	L	D	.	.	.	.	.	.	.	.	.	.	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	E	.	.	V	K	D	G	C	I	A	I	A	C	P
Query Conservation																							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence																							.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		F	L	S	L	D	L	G	G	T	N	F	R	V	M	L	V	K	V	G	E	G	E	E	G	Q	W	S	V	K	T	K	H	Q	M	Y	S	I	P	E	D	A	M	T	G	T	A	E	M	L	F	D	Y	I	S	E	C	I	S	D	F	L	D	K	H	Q	M	K	H	K	K	L	P	L	G	F	T	F	S	F	P
Template Known Secondary structure								S	S	S													S	S	S															S	T	T	T	S	S	B																		T	T	T		T	T											S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		67	.				.	70	.	.	.	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		I	T	.	.	.	G	D	W	V	A	M	T	N	H	T	W	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	E	M	K	K	N	.	.	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K
Query Conservation				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence				.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	H	E	D	I	D	K	G	I	L	L	N	W	T	K	G	F	K	A	S	G	A	E	G	N	N	V	V	G	L	L	R	D	A	I	K	R	R	G	D	F	E	M	D	V	V	A	M	V	N	D	T	V	A	T	M	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	Y	Y	E	D	H	Q
Template Known Secondary structure							T	T									T	T				B	T		T	T	S	B										T	T	T		S																			.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.															.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.														.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K	R	W	V	S	L	P	G	E	G	G	H	V	D	F	A	P	N	S	E	E	E	A	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.
Template Sequence		C	E	V	G	M	I	V	G	T	G	C	N	A	C	Y	M	E	E	M	Q	N	V	E	L	V	E	G	D	E	.	G	R	M	C	V	N	T	E	W	G	A	F	G	D	S	G	E	L	D	E	F	L	L	E	Y	D	R	L	V	D	E	S	S	A	N	P	G	Q	Q	L	Y	E	K	L	I	G	G	K	Y	M
Template Known Secondary structure									S	S	S									G	G	G		T	T	S	S			S	.	S								G	G	G	T	T	T	T	S	T	T	T	T	T											T	S	S	S	T	T	S									T	T	T
Template Predicted Secondary structure																															.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.															.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																									.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	L	Y	R	A	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	D	N	R	L	P	E	N	L	K	P	K	D	I	T	E	R	A	L	A	D	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	C	R	R	A	L	S	L	F
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	L	V	R	L	V	L	L	R	L	V	D	E	N	L	L	F	H	G	E	A	S	E	Q	L	R	T	R	G	A	F	E	T	R	F	V	S	Q	V	E	S	D	T	G	D	R	K	Q	I	Y	N	I	L	S	T	L	G	L	R	P	S	T	T	D	C	D	I	V	R	R	A	C	E	S	V	S	T	R	A
Template Known Secondary structure															T	T		S	G	G	G				T	G	G	G	S	T	T		S									T	T			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.								.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																					.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.
Query Sequence		C	V	I	M	G	R	F	G	G	N	L	A	L	N	L	G	T	F	G	.	.	.	.	.	.	.	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A	S	G	F	R	A	A	F	E	D	K	G	R	F	K	E	Y	V	H	D	I	P	V	Y	L	I	V	H	D	N	P	G	L	L	G	S	G
Query Conservation																					.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																.	.	.	.	.	.							.	.
Template Conservation																																											.	.	.	.	.	.							.	.
Template Sequence		A	H	M	C	S	A	G	L	A	G	V	I	N	R	M	R	E	S	R	S	E	D	V	M	R	I	T	V	G	V	D	G	S	V	Y	K	L	H	P	S	F	.	.	.	.	.	.	K	E	R	F	H	A	.	.	S	V	R	R	L	T	P	S	C	E	I	T	F	I	E	S	E	E	G	S	G	R	G	A	A
Template Known Secondary structure																		T	T			S	S	S															S	T	T		.	.	.	.	.	.							.	.							T	T									S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.							.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.							420	.	.	.	.	.			.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		311	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		451	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions