Job Description P0A6V8 Confidence 99.32% Date Thu Jan 5 11:04:01 GMT 2012 Rank 50 Aligned Residues 286 % Identity 17% Template c1qhaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (hexokinase); PDBTitle: human hexokinase type i complexed with atp analogue amp-pnp Resolution 2.25 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.													.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																							.	.	.	.													.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		A	L	V	G	D	V	G	G	T	N	A	R	L	A	L	C	D	I	A	S	G	.	.	.	.	E	I	S	Q	A	K	T	Y	S	G	L	D	.	.	.	.	.	.	.	.	.	.	Y	P	S	L	E	A	V	I	R	V	Y	L	E	E	H	K	V	.	.	E	V	K	D	G	C	I	A	I	A	C	P	I	T
Query Conservation																							.	.	.	.													.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																							.	.	.	.													.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		F	L	A	L	D	L	G	G	T	N	F	R	V	L	L	V	K	I	R	S	G	K	K	R	T	V	E	M	H	N	K	I	Y	A	I	P	I	E	I	M	Q	G	T	G	E	E	L	F	D	H	I	V	S	C	I	S	D	F	L	D	Y	M	G	I	K	G	P	R	M	P	L	G	F	T	F	S	F	P	C	Q
Template Known Secondary structure								S	S	S												S	S	S																		T	S	B	S																		T	T			S	S										S
Template Predicted Secondary structure
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.
					69	70	.	.	.	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		.	.	.	G	D	W	V	A	M	T	N	H	T	W	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	A	E	M	K	K	N	.	.	L	G	F	S	H	L	E	I	I	N	D	F	T	A	V	S	M	A	I	P	M	L	K	K	E	H	L	I	Q	F	G	G	A	E	P	V	E	G	K	P	I
Query Conservation		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence		.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.									.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	T	S	L	D	A	G	I	L	I	T	W	T	K	G	F	K	A	T	D	C	V	G	H	D	V	V	T	L	L	R	D	A	I	K	R	R	E	E	F	D	L	D	V	V	A	V	V	N	D	T	V	G	T	M	M	T	C	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	E	E	P	T	C	E	V	G
Template Known Secondary structure					T	T									T	T				B	T		T	T	S	B													T	S																					T	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		608	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.													.	.	670	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	Y	G	A	G	T	G	L	G	V	A	H	L	V	H	V	D	K	R	W	V	S	L	P	G	E	G	G	H	V	D	F	A	P	N	S	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	I	L	E	I	L	R	A	E	I	G	H	V	S	A	E	R	V	L	S	G	P	G	L	V	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.
Template Sequence		L	I	V	G	T	G	S	N	A	C	Y	M	E	E	M	K	N	V	E	M	V	E	.	.	.	G	D	Q	G	Q	M	C	I	N	M	E	W	G	A	F	G	D	N	G	C	L	D	D	I	R	T	H	Y	D	R	L	V	N	E	Y	S	L	N	A	G	K	Q	R	Y	E	K	M	I	S	G	M	Y	L	G	E
Template Known Secondary structure					S	S	S									G	G	G		T	T	S	S	.	.	.			S	S								G	G	G	T	T	S	S	S	T	T	T	T	T											T	S	T	T	T	T	S								S	T	T	T
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		676	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.				.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.
		198	.	200	.	.	.	.	.													.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.																											.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	R	A	I	V	K	A	.	.	.	.	.	.	.	.	.	.	.	.	D	N	R	L	P	E	N	L	K	P	K	D	I	T	E	R	A	L	A	D	S	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	C	R	R	A	L	S	L	F	C	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	R	N	I	L	I	D	F	T	K	K	G	F	L	F	R	G	Q	I	S	E	T	L	K	T	R	G	I	F	E	T	K	F	L	S	Q	I	E	S	D	R	L	A	L	L	Q	V	R	A	I	L	Q	Q	L	G	L	N	S	T	C	D	D	S	I	L	V	K	T	V	C	G	V	V	S	R	R	A	A	Q
Template Known Secondary structure													T	T	S	S	G	G	G				T	T	T	T	S	T	T		S									T		T	T														T
Template Predicted Secondary structure
Template SS confidence
		753	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.								.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		I	M	G	R	F	G	G	N	L	A	L	N	L	.	.	.	.	.	.	.	G	T	F	G	G	V	F	I	A	G	G	I	V	P	R	F	L	E	F	F	K	A	S	G	F	R	A	A	F	E	D	K	G	R	F	K	E	Y	V	H	D	I	P	V	Y	L	I	V	H	D	N	P	G	L	L	G	S	G	A	H
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																.	.	.	.	.	.											.	.
Template Conservation																																					.	.	.	.	.	.											.	.
Template Sequence		L	C	G	A	G	M	A	A	V	V	D	K	I	R	E	N	R	G	L	D	R	L	N	V	T	V	G	V	D	G	T	L	Y	K	L	.	.	.	.	.	.	H	P	H	F	S	R	I	M	H	Q	.	.	T	V	K	E	L	S	P	K	C	N	V	S	F	L	L	S	E	D	G	S	G	K	G	A	A	L	I
Template Known Secondary structure																		T	T		S	S															.	.	.	.	.	.		T	T								.	.							T	T									T	T		S
Template Predicted Secondary structure																																					.	.	.	.	.	.											.	.
Template SS confidence
		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.							.	.	870	.	.	.	.	.	.	.			.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
		313
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		905

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions