Job Description P0A8A2 Confidence 12.54% Date Thu Jan 5 11:07:18 GMT 2012 Rank 76 Aligned Residues 119 % Identity 18% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

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		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	S	N	V	N	R	T	I	A	N	V	R	T	I	F	N	K	K	G	G	N	I	G	A	A	G	S	V	S	Y	M	F	D	N	T	G	V	I	V	F	K	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	H	I	F	E	I	L	L	E	A	E	V	D	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																								.																																																								.	.
Template Sequence		L	S	S	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	G	I	E	.	V	T	Q	A	T	L	S	R	D	L	E	E	L	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V	S	G	G	T	D	R	M	A	R	L	L	G	E	L	L	.	.
Template Known Secondary structure				T					S											T	T			.												T	T	T							T	T	S	S										S						T	T	T	T													.	.
Template Predicted Secondary structure																								.																																																								.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		R	D	V	T	E	E	E	G	N	I	V	I	Y	T	E	P	T	D	L	H	K	G	I	A	A	L	K	A	A	G	I	T	E	F	S	T	T	E	L	E	M	I	A	Q	S	E	V	E	L	.	.	.	S	P	E	D	L	E	I	F	E	G	L	V	D	A	L	E
Query Conservation																																																			.	.	.
Alig confidence																																							.	.	.										.	.	.
Template Conservation																																							.	.	.
Template Sequence		V	S	T	D	D	S	G	N	L	A	V	L	R	T	P	P	G	A	A	H	Y	L	A	S	A	I	D	R	A	A	L	P	Q	V	V	G	T	.	.	.	I	A	G	D	D	T	I	L	V	V	A	R	E	P	T	T	G	A	Q	L	A	G	M	F	E	N	L	R
Template Known Secondary structure								T	T							S	T	T	T											T	T		T	T					.	.	.				S	S								T	T												T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions