Job Description P0A8A2 Confidence 22.89% Date Thu Jan 5 11:07:18 GMT 2012 Rank 24 Aligned Residues 61 % Identity 21% Template c2b8kD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase ii 32 kda PDBTitle: 12-subunit rna polymerase ii Resolution 4.15 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		Y	T	E	P	T	D	L	H	K	G	I	A	A	L	K	A	A	G	I	T	E	F	S	T	T	E	L	E	M	I	A	Q	S	E	V	E	L	S	P	E	D	L	E	I	F	E	G	L	V	D	A	L	E	.	.	.	D	D	D	D	V	Q	K	V	Y	H	N	V	A	N	L
Query Conservation																																																							.	.	.
Alig confidence																													.	.	.	.	.	.	.																				.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		F	R	D	Q	E	T	V	G	A	V	I	Q	L	L	K	S	T	G	L	H	P	F	E	V	A	Q	L	.	.	.	.	.	.	.	G	S	L	A	C	D	T	A	D	E	A	K	T	L	I	P	S	L	N	N	K	I	S	D	D	E	L	E	R	I	L	K	E	L	S	N	L
Template Known Secondary structure					T	T										T	T	S				T	T						.	.	.	.	.	.	.			S			S	S								S	T	T		T	T	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions