Job Description P0A8A2 Confidence 30.96% Date Thu Jan 5 11:07:18 GMT 2012 Rank 17 Aligned Residues 27 % Identity 26% Template c1p65A_ PDB info PDB header:viral protein Chain: A: PDB Molecule:nucleocapsid protein; PDBTitle: crystal structure of the nucleocapsid protein of porcine reproductive2 and respiratory syndrome virus (prrsv) Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		T	I	A	N	V	R	T	I	F	N	K	K	G	G	.	.	N	I	G	A	A	G	S	V	S	Y	M	F	D
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		C	L	S	S	I	Q	T	A	F	N	Q	G	A	G	T	C	T	L	S	D	S	G	R	I	S	Y	T	V	E
Template Known Secondary structure													T		S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions