 |
Job Description | P0ADJ3 | Confidence | 2.77% | Date | Thu Jan 5 11:21:09 GMT 2012 |
Rank | 58 | Aligned Residues | 46 |
% Identity | 15% | Template | d1vnda_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | N | E | P | D | T | L | P | D | P | A | I | G | Y | I | F | Q | N | D | I | V | A | L | K | Q | A | F | S | L | P | D | I | D | Y | A | D | I | S | Q | R | E | Q | L | A | A | A | L |
Query Conservation |   |
  |
|
|
|
|   |   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |
|   | . | . |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
A | S | D | G | L | P | N | K | K | R | K | R | R | V | L | F | T | K | A | Q | T | Y | E | L | E | R | R | F | R | . |
. |
Q | Q | R | Y | L | S | A | P | E | R | E | H | L | A | S | L | I |
Template Known Secondary structure |   |
|
| S |
|
| S | S | S | S |
| S | S |
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  | . | . |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|