Job Description P76177 Confidence 8.22% Date Thu Jan 5 12:20:10 GMT 2012 Rank 70 Aligned Residues 149 % Identity 16% Template c2j58G_ PDB info PDB header:membrane protein Chain: G: PDB Molecule:outer membrane lipoprotein wza; PDBTitle: the structure of wza Resolution 2.26 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		F	D	R	V	V	V	T	G	R	F	N	A	I	G	E	A	V	K	A	V	S	R	R	A	D	K	E	G	A	A	S	F	Y	V	V	D	T	S	D	F	G	N	S	G	N	W	R	V	V	A	D	L	Y	K	A	D	A	E	K	A	E	E	T	S	N	R	V	I	N	G	V	V	E	L	P	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence										.	.																														.																																				.	.	.	.	.
Template Conservation										.	.																														.
Template Sequence		I	G	K	V	Q	V	A	G	.	.	K	T	V	S	Q	V	R	Q	D	I	T	S	R	L	T	T	Y	I	E	S	P	Q	V	D	V	S	I	A	A	.	F	R	S	Q	K	V	Y	V	T	G	E	V	A	N	S	G	K	Q	A	I	T	N	I	P	L	T	V	X	D	A	I	N	A	A	G	G	L	A	A	D
Template Known Secondary structure		T						T	T	.	.															T	T	T	S	S	S										.			S								S	B	S	S								S	S			B								T	T	S	B		T	T
Template Predicted Secondary structure										.	.																														.
Template SS confidence
		131	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
																													112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	Q	A	V	L	I	E	P	F	D	T	V	T	V	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	R	S	Q	P	E	V	N	D	A	I	T	K	A	A	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	W	R	N	V	V	L	T	H	N	G	K	D	T	K	I	S	L	Y	A	L	X	Q	K	G	D	L	T	Q	N	H	L	L	Y	H	G	D	I	L	F	I	P	S	N	D	D	L	K	V	F	V	X	G	E	V	G	K	Q	S	T	L	K	X	D	R	S	G	X	T	L	A	E	A	L	G	N	A	E	G
Template Known Secondary structure		B		T	T							T	T												T	T		B	G	G	G			B			T	T							B	G	G	G								S	B	S	S							B	T	T	B		B								T	T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		146	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure						.																												.	.	.	.	.	.	.	.	.
Query SS confidence						.																												.	.	.	.	.	.	.	.	.
Query Sequence		A	K	G	A	.	Y	S	F	Y	I	V	R	Q	I	D	A	N	Q	G	G	N	Q	R	I	T	A	F	I	Y	K	K	D	.	.	.	.	.	.	.	.	.	A	K	K	R	I	V	Q	S	P	D	V	I
Query Conservation						.																												.	.	.	.	.	.	.	.	.
Alig confidence						.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	Q	E	X	S	D	A	T	G	I	F	V	V	R	Q	L	K	G	D	R	T	G	K	I	A	D	I	Y	Q	L	N	A	Q	D	A	S	A	X	V	L	G	T	E	F	Q	L	Q	P	Y	D	I	V
Template Known Secondary structure		B		T	T	T														S		T	T	S											S	S	G	G	G					T	T		B			T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions