Return to main results Retrieve Phyre Job Id

Job DescriptionQ46835
Confidence2.33%DateThu Jan 5 12:35:01 GMT 2012
Rank40Aligned Residues20
% Identity15%Templatec3qhsD_
PDB info PDB header:rna binding proteinChain: D: PDB Molecule:protein hfq; PDBTitle: crystal structure of full-length hfq from escherichia coli
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.......
Predicted Secondary structure 





Query SS confidence 



















Query Sequence  NYSITINDTRTGNQYQRKLD
Query Conservation   
 
 





       
 
Alig confidence 



















Template Conservation   
 


     








Template Sequence  QFVILLKNTVSQMVYKHAIS
Template Known Secondary structure  SSSSSGGG
Template Predicted Secondary structure 



Template SS confidence 



















   41........50.........60
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions