Job Description Q46835 Confidence 1.65% Date Thu Jan 5 12:35:01 GMT 2012 Rank 83 Aligned Residues 34 % Identity 32% Template c3k1qP_ PDB info PDB header:virus Chain: P: PDB Molecule:vp5: membrane-penetration protein (outer shell); PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics Resolution 4.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		S	V	T	G	L	L	S	G	C	A	S	H	N	E	N	A	.	S	L	L	A	K	K	Q	A	Q	N	I	S	Q	N	L	P	I	K
Query Conservation																		.
Alig confidence																		.
Template Conservation
Template Sequence		S	E	V	G	S	L	V	G	S	S	S	T	L	S	Q	A	I	S	T	M	A	G	K	D	L	D	L	I	E	A	D	T	P	L	P
Template Known Secondary structure		S	S		S																			T	T	S	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions