Job Description P0A6C8 Confidence 100.00% Date Thu Jan 5 11:02:50 GMT 2012 Rank 28 Aligned Residues 220 % Identity 20% Template c3l76B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of aspartate kinase from synechocystis Resolution 2.54 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	I	K	L	G	G	V	L	L	D	S	E	E	A	L	E	R	L	F	S	A	L	V	N	Y	R	E	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K	K	K	N	G	L	R	V	T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G	T
Query Conservation
Alig confidence																																																						.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.
Template Sequence		L	I	V	Q	K	F	G	G	T	S	V	G	T	V	E	R	I	Q	A	V	A	Q	R	I	K	R	T	V	Q	G	G	N	S	L	V	V	V	V	S	A	M	G	K	S	T	D	V	L	V	D	L	A	.	.	.	.	.	.	Q	Q	I	S	P	N	P	C	R	R	E	M	D	M	L	L	S	T	G	E	Q	V
Template Known Secondary structure									S	G	G	G	S	S																T	T	T											S	T										.	.	.	.	.	.		T	T		S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.													.	.	.
Query SS confidence																																																																		.													.	.	.
Query Sequence		A	N	K	T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	D	E	E	L	G	H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	Y	L	P	V	V	S	S	.	I	G	V	T	D	E	G	Q	L	M	N	V	.	.	.
Query Conservation																																																																		.													.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.																.													.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	I	A	L	L	S	L	A	L	Q	E	I	D	Q	P	A	I	S	L	T	G	A	Q	V	G	I	V	T	E	L	E	I	R	P	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	H	H	L	R	E	G	K	V	V	V	V	A	G	F	Q	G	I	S	E	H	L	E	I	T	T	L	G	R	G
Template Known Secondary structure													T	T								G	G	G	T													.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T																						T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.														.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																		.																					.	.	.	.	.	.
Query SS confidence																		.																					.	.	.	.	.	.
Query Sequence		N	A	D	Q	A	A	T	A	L	A	A	T	L	G	A	D	.	L	I	L	L	S	D	V	S	G	I	L	D	G	K	G	Q	R	I	A	E	.	.	.	.	.	.	M	T	A	A	K	A	E	Q	L	I	E	Q	G	I	I	T	D	G	M	I	V	K	V	N	A	A	L	D	A	A	R	T	L	G	R	P	V
Query Conservation																		.																					.	.	.	.	.	.
Alig confidence																		.																					.	.	.	.	.	.										.	.												.	.	.
Template Conservation																																																						.	.												.	.	.
Template Sequence		G	S	D	T	S	A	V	A	L	A	A	A	L	K	A	D	F	C	E	I	Y	T	D	V	P	G	I	L	T	T	D	P	R	L	V	P	E	A	Q	L	M	A	E	I	T	C	D	E	M	L	E	L	.	.	A	S	L	G	A	K	V	L	H	P	R	.	.	.	A	V	E	I	A	R	N	Y	G	I	P	L
Template Known Secondary structure														T	T		S							S	S	S	S		B	S	S		T	T	T		T	T			B		S										T	.	.	G	G	G	G	T	T	T					.	.	.								T	T
Template Predicted Secondary structure																																																						.	.												.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	A	S	W	R	H	A	E	Q	L	P	A	L	F	N	G	M	P	M	G	T	R	I
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.
Template Sequence		V	V	R	S	S	W	S	D	.	.	.	.	.	.	.	.	.	E	P	G	T	K	V	V
Template Known Secondary structure						T	T			.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.										.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions