Job Description P0A6C8 Confidence 100.00% Date Thu Jan 5 11:02:50 GMT 2012 Rank 18 Aligned Residues 231 % Identity 22% Template c3k4yB_ PDB info PDB header:transferase Chain: B: PDB Molecule:isopentenyl phosphate kinase; PDBTitle: crystal structure of isopentenyl phosphate kinase from m. jannaschii2 in complex with ipp Resolution 2.54 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		M	M	N	P	L	I	I	K	L	G	G	V	L	L	D	S	E	E	A	.	.	.	.	.	.	.	.	L	E	R	L	F	S	A	L	V	N	Y	R	E	.	.	.	.	.	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K	K	K	N	G	L	R	V
Query Conservation																					.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence					.	.															.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation					.	.
Template Sequence		M	L	T	.	.	I	L	K	L	G	G	S	I	L	S	D	K	N	V	P	Y	S	I	K	W	D	N	L	E	R	I	A	M	E	I	K	N	A	L	D	Y	Y	K	N	Q	N	K	E	I	K	L	I	L	V	H	G	G	G	A	F	G	H	P	V	A	K	K	Y	L	K	I	E	D	G	K	K	I	F	I	N
Template Known Secondary structure					.	.						T	T	T	S	S		T	T	S	T	T																								T	T																					T	T				S	S	S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G	T	A	N	K	T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	D	E	E	L	G	H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	Y	L	P	V	V	.	S
Query Conservation																																																																																.
Alig confidence		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	M	E	K	G	F	W	E	I	Q	R	A	M	R	R	F	N	N	I	I	I	D	T	L	Q	S	Y	D	I	P	A	V	S	I	Q	P	S	S	F	V	V	F	G	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	I	F	D	T	S	A	I	K	E	M	L	K	R	N	L	V	P	V	I	H	G
Template Known Secondary structure		.	.																										T	T								G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	.	S	S														T	T
Template Predicted Secondary structure		.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120													.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		S	I	G	V	T	D	E	G	Q	L	M	N	V	N	A	D	Q	A	A	T	A	L	A	A	T	L	G	A	D	.	L	I	L	L	S	D	V	S	G	I	L	D	G	K	G	Q	R	I	A	E	M	T	A	A	K	A	E	Q	L	I	E	Q	G	I	I	T	D	G	M	I	V	K	V	N	A	A	L	D	A	A
Query Conservation																															.
Alig confidence																															.																.																.	.	.	.												.	.	.	.
Template Conservation																																															.																.	.	.	.												.	.	.	.
Template Sequence		D	I	V	I	D	D	K	N	G	Y	R	I	I	S	G	D	D	I	V	P	Y	L	A	N	E	L	K	A	D	L	I	L	Y	A	T	D	V	D	G	V	L	I	D	N	K	.	P	I	K	R	I	D	K	N	N	I	Y	K	I	L	N	.	.	.	.	Y	L	G	M	K	Y	K	I	E	M	I	.	.	.	.
Template Known Secondary structure							T	T	T																			T		S							S	S	S	S	S			T	T		.			S				S	S	T	T						.	.	.	.											T	.	.	.	.
Template Predicted Secondary structure																																															.																.	.	.	.												.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	L	G	R	P	V	D	I	A	S	W	R	H	A	E	Q	L	P	A	L	F	N	G	M	P	M	G	T	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	N	K	C	R	G	F	V	F	N	G	N	K	A	N	N	I	Y	K	A	L	L	G	E	V	E	G	T	E	I
Template Known Secondary structure		T	T	T	T								S	S	S	T	T							T	T				S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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