Job Description P0A6C8 Confidence 100.00% Date Thu Jan 5 11:02:50 GMT 2012 Rank 4 Aligned Residues 253 % Identity 34% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	L	I	I	K	L	G	G	V	L	L	D	S	E	E	A	L	E	R	L	F	S	A	L	V	N	Y	R	E	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K	K	K	N	G	L	R	V	T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		K	T	I	V	V	K	Y	G	G	A	A	M	T	S	P	E	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	.	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	L	N	I	P	A	E	F	R	D	G	L	R	V	T	D	A	T	T	M	E	I	V	S	M	V	L	V	G
Template Known Secondary structure										T																						T	T			.																		T	T							T	T				B
Template Predicted Secondary structure																																				.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		T	A	N	K	T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	.	.	D	E	E	L	G	H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	Y	L	P	V	V	S	S	I	G	V	T	D	E	G	Q	L	M	N	V	N
Query Conservation																																			.	.
Alig confidence																																			.	.
Template Conservation
Template Sequence		K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V	P	N	S	A	Q	L	G	F	V	G	E	V	A	R	V	D	P	S	V	L	R	P	L	V	D	Y	G	Y	I	P	V	I	A	S	V	A	A	D	D	S	G	Q	A	Y	N	I	N
Template Known Secondary structure		T												T	T	S							T	T	G	G	G								T	T					B	S									G	G	G							T	T							S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																	.																.	.	.
Query SS confidence																	.																.	.	.
Query Sequence		A	D	Q	A	A	T	A	L	A	A	T	L	G	A	D	.	L	I	L	L	S	D	V	S	G	I	L	D	G	K	G	.	.	.	Q	R	I	A	E	M	T	A	A	K	A	E	Q	L	I	E	Q	G	I	I	T	D	G	M	I	V	K	V	N	A	A	L	D	A	A	R	T	L	G	R	P	V	D	I	A	S
Query Conservation																	.																.	.	.
Alig confidence																	.																.	.	.
Template Conservation
Template Sequence		A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N	K	E	D	P	S	S	L	I	K	E	I	D	I	K	G	V	K	K	M	I	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C	I	R	S	L	A	Q	G	V	K	T	A	S	I	I	D
Template Known Secondary structure														T		S							S	S	S	S			S	S	S	S		T	T	S																T	T	S	S		T	T														T	T		S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		237	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		W	R	H	A	E	Q	L	P	.	A	L	F	N	G	M	P	M	G	T	R	I
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I
Template Known Secondary structure		T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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