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Job DescriptionP0A6C8
Confidence100.00%DateThu Jan 5 11:02:50 GMT 2012
Rank33Aligned Residues240
% Identity17%Templatec2cdqB_
PDB info PDB header:transferaseChain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..
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Query Sequence  NPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKK. . . . . . . . . . . . . . . . . . . .
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Template Sequence  ITCVMKFGGSSVASAERMKEVADLILTFPEES. . PVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRT
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GGGGSS
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GGGSTT
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   27..30.........40.........50........ .60.........70.........80.........90.........100....
 
   63......70.........80.........90.........100.........110.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . NGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDE
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Template Sequence  VKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTN
Template Known Secondary structure  T

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TT


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   105....110.........120.........130.........140.........150.........160.........170.........180....
 
   118.120.........130.........140..... ....150. ........ 160.........170..... ....180.........190.
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Query Sequence  ELGHVGLAQPGSPKLINSLLENGYLPVV. SSIGVT. DEGQLMNV. . . NADQAATALAATLGAD. LILLSDVSGILDGKGQ
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Template Sequence  GDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPT
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B
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TTT




SSTT
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   185....190.........200.........210.........220.........230.........240.........250.........260....
 
   192... ....200.........210.........220.........230.........240.........250........
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Query Sequence  RIAE. . . . . . MTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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Template Sequence  IYKRATPVPYLTFDEAAEL. . AYFGAQVLHPQ. . . SMRPAREGEIPVRVKNSYNP. . . . . . . . . KAPGTIITK
Template Known Secondary structure  T
TT

B

TT..TTTSSS


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   265....270.........280... ......290.... .....300.........310.... .....320...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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