Job Description P0A6C8 Confidence 40.23% Date Thu Jan 5 11:02:50 GMT 2012 Rank 53 Aligned Residues 133 % Identity 17% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	L	G	G	V	L	L	D	S	E	E	A	L	E	R	L	F	S	A	L	V	N	Y	R	E	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K	K	K	N	G	L	R	V	T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G	T	A	N	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	.	.	.	.	.	.	.	A	S	F	G	.	K	P	I	I	L	S	T	G	M	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	E	S	I	K	K	S	.	.	.	.	.	.	.
Template Known Secondary structure						G	G	G	T	T									.	.	.	.	.	.	.		T	T		.	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.		.	150	.	.	.	.	.	.	.	.																											.	160	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	D	E	E	L	G	H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	Y	L	P	V	V	S	S	I	G	V	T	D	E	G	Q	L	M	N	V	N	A	D	Q	A	A	T
Query Conservation
Alig confidence		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	V	E	I	I	R	E	A	G	V	P	Y	A	L	L	H	C	T	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	G	L	S	D	H	T	L	.	.	.	.	.	.	.	.	.	D	N	Y	A	C
Template Known Secondary structure		.	.								T												.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T										T	T	S								S	S	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure		.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.
Template SS confidence
				167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.														.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.
		167	.	.	170	.	.	.	.	.	.	.		.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure													.		.
Query SS confidence													.		.
Query Sequence		A	L	A	A	T	L	G	A	D	L	I	.	L	.	L	S	D	V	S	G	I	L	D	G	K	G	Q	R	I	A	E	M	T	A	A	K	A	E	Q	L	I	E
Query Conservation													.		.
Alig confidence													.		.															.	.
Template Conservation																														.	.
Template Sequence		L	G	A	V	A	L	G	G	S	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	I	V	C	.	.	S	M	N	P	D	T	F	K	E	L	K	Q
Template Known Secondary structure								T								B		S		T	T			S	T	T	G	G	G	.	.		B
Template Predicted Secondary structure																														.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions