Job Description P0A6C8 Confidence 19.89% Date Thu Jan 5 11:02:50 GMT 2012 Rank 74 Aligned Residues 149 % Identity 14% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	L	G	G	V	L	L	D	S	E	E	A	L	E	R	L	F	S	A	L	V	N	Y	R	E	S	H	Q	R	P	L	V	I	V	H	G	G	G	C	V	V	D	E	L	M	K	G	L	N	L	P	V	K	K	K	N	G	L	R	V	T	P	A	D	Q	I	D	I	I	T	G	A	L	A	G	T	A	N	K
Query Conservation
Alig confidence																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	.	.	.	.	.	.	.	A	R	L	N	.	R	P	X	I	F	S	T	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	S	D	V	H	E	A	.	.	.	.	.	.	.
Template Known Secondary structure						G	G	G	T	T									.	.	.	.	.	.	.		T	T		.	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.								.	.	.	.		.	.	.	150	.	.	.	.	.	.																											.	.	.	160	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		T	L	L	A	W	A	K	K	H	Q	I	A	A	V	G	L	F	L	G	D	G	D	S	V	K	V	T	Q	L	D	E	E	L	G	H	V	G	L	A	Q	P	G	S	P	K	L	I	N	S	L	L	E	N	G	.	Y	L	P	V	V	S	S	I	G	V	T	D	E	G	Q	L	M	N	V	N	A	D	Q	A	A
Query Conservation																																																								.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.																											.													.	.	.	.	.	.	.	.	.
Template Conservation		.	.															.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		.	.	W	R	T	I	R	A	E	G	N	N	Q	I	A	I	.	.	.	.	.	.	.	.	.	.	.	.	X	H	C	V	A	K	Y	P	A	P	P	E	Y	S	N	L	S	V	I	P	X	L	A	A	A	F	P	E	A	V	I	G	F	S	D	H	S	E	H	.	.	.	.	.	.	.	.	.	P	T	E	A
Template Known Secondary structure		.	.						T	T	T							.	.	.	.	.	.	.	.	.	.	.	.					S	S	S	S			G	G	G			T	T									S	T	T	S									S	S	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure		.	.															.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
				165	.	.	.	.	170	.	.	.	.	.	.	.	.													.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.
		166	.	.	.	170	.	.	.	.	.	.	.		.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure														.		.
Query SS confidence														.		.
Query Sequence		T	A	L	A	A	T	L	G	A	D	L	I	.	L	.	L	S	D	V	S	G	I	L	D	G	K	G	Q	R	I	A	E	M	T	A	A	K	A	E	Q	L	I	E	Q	G	I	I	T	D	G	M	I	V	K	V	N	A	A	L	D	A	A	R	T	L	G	R	P
Query Conservation														.		.
Alig confidence														.		.															.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.											.	.	.	.	.	.	.	.	.	.
Template Sequence		P	C	A	A	V	R	L	G	A	K	L	I	E	K	H	F	T	I	D	K	N	L	P	G	A	D	H	S	F	.	.	A	L	N	P	D	E	L	K	E	X	.	.	.	.	.	.	.	.	.	.	V	D	G	I	R	K	T	E	A	E	L	K	Q	G	I	T	K
Template Known Secondary structure								T	T		S						B		S		T	T	S	S		S	S		T	T	.	.	S	B									.	.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure																															.	.											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260											.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions