 |
Job Description | P05791 | Confidence | 38.50% | Date | Thu Jan 5 10:58:53 GMT 2012 |
Rank | 40 | Aligned Residues | 76 |
% Identity | 14% | Template | d1uika2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.30 |
|
 |
  |   |
408 | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
|
. | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | I | R | S | L | E | H | A | Y | S | K | D | G | G | L | A | V | L | Y | G | N | F | A | E | N | G | C | I | V | K | T | . |
. |
A | G | V | D | D | S | I | L | K | F | T | G | P | A | K | V | Y | E | S | Q | D | D | A | V | E | A | I | L | G | G | K | V | V | A | G | D | V | V | V | I | R | Y | E | G | P | K | G |
Query Conservation |   |
|
|
|   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|
|
|
|   | . | . |
|
|
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
| . | . | . | . |
|
|
|
Template Sequence |   |
E | I | T | P | E | K | N | P | Q | L | R | D | L | D | V | F | L | S | V | V | D | M | N | E | G | A | L | F | L | P | H | F | N | S | K | A | I | V | V | L | V | I | N | E | G | E | A | N | I | E | L | V | G | I | P | L | E | V | R | K | Y | R | A | E | L | S | E | Q | D | I | F | V | I | . |
. |
. |
. |
P | A | G |
Template Known Secondary structure |   |
 |  |
| T | T | T |
|  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| T | T |
|  |  |  |  | . | . | . | . |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
378 | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
|
. | . | . |
  |
  |   |
486 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
G | P |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
Y | P |
Template Known Secondary structure |   |
|
|
Template Predicted Secondary structure |   |
|  |
Template SS confidence |   |
|
|
  |   |
466 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|