Job Description P05791 Confidence 33.94% Date Thu Jan 5 10:58:53 GMT 2012 Rank 48 Aligned Residues 90 % Identity 19% Template c3ksmA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc-type sugar transport system, periplasmic component; PDBTitle: crystal structure of abc-type sugar transport system, periplasmic2 component from hahella chejuensis Resolution 1.90 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	I	A	V	V	N	S	F	T	Q	F	V	P	G	H	V	H	L	R	D	L	G	K	L	V	A	E	Q	I	E	A	A	G	G	V	A	K	E	F	N	T	I	A	V	D	D	G	I	A	M	G	H	G	G	M	L	Y	S	L	P	S	R	E	L	I	A	D	S	V	E	Y	M	V	N	A	H	C	A	D
Query Conservation
Alig confidence									.	.	.	.																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		P	K	L	L	L	V	L	.	.	.	.	K	G	D	S	N	A	Y	W	R	Q	V	Y	L	G	A	Q	K	A	A	D	E	A	G	.	.	.	.	.	.	V	T	L	L	H	R	S	T	K	D	D	G	D	.	.	.	.	.	.	.	.	.	I	A	G	Q	I	Q	I	L	S	Y	H	L	S	Q	A	P	P	D
Template Known Secondary structure									.	.	.	.	S		S	S	S	T																	T	.	.	.	.	.	.									S	S	T	T		.	.	.	.	.	.	.	.	.															S			S
Template Predicted Secondary structure									.	.	.	.																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	V	C	I	S	N	C	D	K	I	T	P	G	M	L	M	A	S	L	R	L	N	I	P	V	I	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	L	A	P	N	S	A	E	D	L	T	P	S	V	A	Q	Y	R	A	R	N	I	P	V	L	V	V
Template Known Secondary structure								S	S	T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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