Job Description P05791 Confidence 22.43% Date Thu Jan 5 10:58:53 GMT 2012 Rank 91 Aligned Residues 54 % Identity 19% Template c2dhgA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trna selenocysteine associated protein (secp43); PDBTitle: solution structure of the c-terminal rna recognition motif2 in trna selenocysteine associated protein Resolution UNK

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		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470		.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
Predicted Secondary structure																									.												.	.						.
Query SS confidence																									.												.	.						.
Query Sequence		N	G	C	I	V	K	T	A	G	V	D	D	S	I	L	K	F	T	G	P	A	K	V	.	Y	E	S	Q	D	D	A	V	E	A	I	.	.	L	G	G	K	V	.	V	A	G	D	V	V	V	I	R	Y	E	G	P	K	G
Query Conservation																									.												.	.						.
Alig confidence																									.												.	.						.
Template Conservation
Template Sequence		Y	P	S	C	R	G	G	K	V	V	L	D	Q	T	G	V	S	K	G	Y	G	F	V	K	F	T	D	E	L	E	Q	K	R	A	L	T	E	C	Q	G	A	V	G	L	G	S	K	P	V	R	L	S	V	A	I	P	K	A
Template Known Secondary structure			T	T										T	T												S												T	T	T			S	S	S	S	S						B
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions