Job Description P27241 Confidence 99.46% Date Thu Jan 5 11:43:20 GMT 2012 Rank 3 Aligned Residues 194 % Identity 20% Template c2wqqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-2,3-/2,8-sialyltransferase; PDBTitle: crystallographic analysis of monomeric cstii Resolution 2.25 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																									.										.	.	.
Query SS confidence																									.										.	.	.
Query Sequence		D	D	V	I	I	F	L	S	G	P	T	S	Q	K	T	P	L	S	V	L	R	T	K	.	D	I	I	A	V	N	G	S	A	.	.	.	Q	Y	L	L	S	N	N	I	V	P	F	I	Y	V	L	T	D	V	R	F	L	H	Q	R	R	D	D	F	Y	K	F	S	Q	R	S	R	Y	T	I	V	N	V	D	V
Query Conservation																									.										.	.	.
Alig confidence																									.										.	.	.														.	.	.																									.	.	.	.
Template Conservation																																																			.	.	.																									.	.	.	.
Template Sequence		K	K	V	I	I	A	G	N	G	P	S	L	K	E	I	D	Y	S	R	L	P	N	D	F	D	V	F	R	C	N	Q	F	Y	F	E	D	K	Y	Y	L	G	K	K	C	K	A	V	F	Y	.	.	.	N	P	S	L	F	F	E	Q	Y	Y	T	L	K	H	L	I	Q	N	Q	E	Y	E	T	E	.	.	.	.
Template Known Secondary structure										S	G	G	G	G				G	G	G			S	S							T	T	G	G	G		S			T	T		S								.	.	.		G	G	G														T	T	S					.	.	.	.
Template Predicted Secondary structure																																																			.	.	.																									.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		Y	E	H	A	S	K	E	D	K	L	Y	I	L	Q	N	C	L	V	L	R	S	F	Y	R	R	.	.	.	.	.	E	K	G	G	F	I	K	K	I	K	F	N	I	L	R	Q	I	H	K	E	L	L	I	S	V	P	L	S	K	K	G	R	L	V	G	F	C	K	D	I	S	L	G	Y	C	S	C	H	T	I
Query Conservation																											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.																																.	.	.	.										.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	I	M	C	S	N	Y	N	Q	A	H	L	E	N	E	N	F	V	K	T	F	Y	D	Y	F	P	D	A	H	L	G	Y	D	F	F	K	Q	L	K	D	F	N	A	Y	F	K	F	H	E	I	Q	.	.	.	.	F	N	Q	R	I	T	S	G	V	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.								S		T	T	T	S							T					S	T	T				T					T	T															.	.	.	.										.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.										.	.	.	.	.	.
Template SS confidence
												75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		A	F	A	A	I	Q	I	A	Y	S	L	K	Y	A	R	I	I	C	S	G	L	D	L	T	G	S	C	S	R	F	Y	D	E	N	K	N	.	.	.	P	M	P	S	E	L	S	R	D	L	F	K	I	L	P	F	F	R	F	M	H	D	N	V	K	D	I	N	I	Y	N	L	S	D	D	T	A	I	S	Y
Query Conservation																																						.	.	.
Alig confidence		.	.																									.	.	.								.	.	.																										.
Template Conservation		.	.																									.	.	.																																				.
Template Sequence		.	.	Y	M	C	A	V	A	I	A	L	G	Y	K	E	I	Y	L	S	G	I	D	F	Y	Y	A	.	.	.	F	D	T	K	Q	K	N	L	L	K	L	A	P	N	F	K	G	H	S	K	N	T	D	I	K	A	L	E	F	L	E	K	T	Y	K	.	I	K	L	Y	C	L	C	P	N	S	L	L	A	N
Template Known Secondary structure		.	.									T	T								S							.	.	.	S												G	G	G																				T	.						S		T	T	S	G	G	G	G
Template Predicted Secondary structure		.	.																									.	.	.																																				.
Template SS confidence
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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