Job Description P27241 Confidence 99.58% Date Thu Jan 5 11:43:20 GMT 2012 Rank 1 Aligned Residues 204 % Identity 20% Template c2p2vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-2,3-sialyltransferase; PDBTitle: crystal structure analysis of monofunctional alpha-2,3-2 sialyltransferase cst-i from campylobacter jejuni Resolution 1.85 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																.										.	.	.
Query SS confidence																																.										.	.	.
Query Sequence		L	I	E	N	K	I	S	D	D	V	I	I	F	L	S	G	P	T	S	Q	K	T	P	L	S	V	L	R	T	K	.	D	I	I	A	V	N	G	S	A	.	.	.	Q	Y	L	L	S	N	N	I	V	P	F	I	Y	V	L	T	D	V	R	F	L	H	Q	R	R	D	D	F	Y	K	F	S	Q	R	S	R	Y
Query Conservation																																.										.	.	.
Alig confidence																																.										.	.	.														.	.	.
Template Conservation																																																										.	.	.
Template Sequence		L	I	V	S	K	N	M	Q	N	I	I	I	A	G	N	G	P	S	L	K	N	I	N	Y	K	R	L	P	R	E	Y	D	V	F	R	C	N	Q	F	Y	F	E	D	K	Y	Y	L	G	K	K	I	K	A	V	F	F	.	.	.	N	P	G	V	F	L	Q	Q	Y	H	T	A	K	Q	L	I	L	K	N	E	Y
Template Known Secondary structure						T	T										S	G	G	G	G	G			G	G	G	S		S	S							T	T	G	G	G		S	B		T	T		S			S					.	.	.		G	G	G														T	T	S
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		T	I	V	N	V	D	V	Y	E	H	A	S	K	E	D	K	L	Y	I	L	Q	N	C	L	V	L	R	S	F	Y	R	R	E	K	G	G	F	I	K	K	I	K	F	N	I	L	R	Q	I	H	K	E	L	L	I	S	V	P	L	S	K	K	G	R	.	.	L	V	G	F	C	K	D	I	S	L	G	Y	C	S
Query Conservation																																																																		.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.													.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.
Template Sequence		E	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	F	C	S	T	F	N	L	P	F	I	E	S	N	D	F	L	H	Q	F	Y	N	F	F	P	D	A	K	L	G	Y	E	V	I	E	N	L	K	E	F	Y	A	Y	I	K	Y	N	E	I	Y	F	N	K	R	I	T	S	G	V	.	.
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	T	S													T	T				T					T	T	S																							.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																													.	.
Template SS confidence
		87	.	.																90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.												.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																															.												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	H	T	I	A	F	A	A	I	Q	I	A	Y	S	L	K	Y	A	R	I	I	C	S	G	L	D	L	T	G	.	S	C	S	R	F	Y	D	E	N	K	N	.	.	.	.	.	.	.	.	.	.	.	P	M	P	S	E	L	S	R	D	L	F	K	I	L	P	F	F	R	F	M	H	D	N	V	K	D	I	N
Query Conservation																															.												.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																								.												.	.	.	.	.	.	.	.	.	.	.					.	.	.																			.
Template Conservation		.	.	.	.	.	.																																																			.	.	.																			.
Template Sequence		.	.	.	.	.	.	Y	M	C	A	I	A	I	A	L	G	Y	K	T	I	Y	L	C	G	I	D	F	Y	E	G	D	V	I	Y	P	F	E	A	M	S	T	N	I	K	T	I	F	P	G	D	F	K	P	S	N	C	.	.	.	H	S	K	E	Y	D	I	E	A	L	K	L	L	K	S	I	Y	K	.	V	N
Template Known Secondary structure		.	.	.	.	.	.										T								S			T	T		S	S				S	S		S	S								S								T	T	.	.	.																		T	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																			.	.	.																			.
Template SS confidence
								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.
		237	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	N	L	S	D	D	T	A	I	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Y	A	L	C	D	D	S	I	L	A	N
Template Known Secondary structure							T	T	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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