Return to main results Retrieve Phyre Job Id

Job DescriptionP33341
Confidence99.90%DateThu Jan 5 11:51:41 GMT 2012
Rank5Aligned Residues111
% Identity23%Templated3bwud1
SCOP infoFimD N-terminal domain-like FimD N-terminal domain-like Usher N-domain
Resolution1.76

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80 .........90.........
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Query Sequence  TFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE. . . . TCLSREVIKRLGINSDNFA. .
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Template Sequence  YFNPRFLADDPQAVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLNTASVAGM
Template Known Secondary structure 


GGGGTT
TTTT
SS
STT
SSTTS


TTB
GGGSTTG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   100.........110.........120.........130......
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Query Sequence  . . . SGKQCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEE
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Template Sequence  NLLADDACVPLTTMVQDATAHLDVGQQRLNLTIPQAFMSN
Template Known Secondary structure  GGS
TT



STT
TTTT

GGGB

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   83......90.........100.........110.........120..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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