 |
Job Description | P33341 | Confidence | 50.02% | Date | Thu Jan 5 11:51:41 GMT 2012 |
Rank | 32 | Aligned Residues | 77 |
% Identity | 19% | Template | c3bryB_ |
PDB info |
PDB header:transport protein | Chain: B: PDB Molecule:tbux; |
PDBTitle: crystal structure of the ralstonia pickettii toluene2 transporter tbux
|
Resolution | 3.20 Å |
|
 |
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | K | Q | S | D | F | V | Q | A | G | Y | Q | Y | G | F | N | N | L | L | T | L | Y | G | G | S | M | V | A | N | N | Y | Y | A | F | T | L | G | A | G | W | N | T | R | I | G | A | I | S | V | D | A | T | K | S | H | S | K | Q | D | N | G | D | V | F | D | G | Q | S | Y | Q | I | A | Y | N | K | F | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   | . |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
N | Y | R | D | I | S | V | F | G | I | G | A | E | Y | R | Y | N | A | K | W | T | F | R | G | G | F | H | Y | A | Q | E | T | T | S | L | T | G | G | V | S | Y | A | I | G | K | N | . |
D | V | I | D | F | A | L | S | V | A | L | R | K | T | S | V | T | H | S | Q | V | N | A | V | I | A | Y | Q | K | R | F |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | S | S | T | T | . |  |  |  |  |  |  |  |  |  |  |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | |
. | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|