Job Description P33341 Confidence 63.16% Date Thu Jan 5 11:51:41 GMT 2012 Rank 27 Aligned Residues 105 % Identity 13% Template c2boiA_ PDB info PDB header:lectin Chain: A: PDB Molecule:cv-iil lectin; PDBTitle: 1.1a structure of chromobacterium violaceum lectin cv2l in2 complex with alpha-methyl-fucoside Resolution 1.1 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	P	N	S	K	Q	N	F	T	P	R	V	Q	G	I	A	Q	S	N	A	L	V	T	I	E	Q	N	G	F	V	V	Y	Q	K	E	V	P	.	P	G	P	F	A	I	T	D	L	Q	L	A	G	G	G	A	D	L	D	V	S	V	K	E	A	D	G	S	V	T	T	Y	L	V	P	Y	A	A	V	P	N	M
Query Conservation																																							.
Alig confidence																			.																				.																								.																		.
Template Conservation																			.																																												.																		.
Template Sequence		L	P	A	R	I	N	F	G	V	T	V	L	V	N	S	A	A	.	T	Q	H	V	E	I	F	V	D	N	E	P	R	A	A	F	S	G	V	G	T	G	D	N	N	L	G	T	K	V	I	N	S	G	S	G	N	V	R	V	Q	I	T	.	A	N	G	R	Q	S	D	L	V	S	S	Q	L	V	L	A	N	.
Template Known Secondary structure				T	T														.									T	T																								T	T	S								.		T	T													T	T	.
Template Predicted Secondary structure																			.																																												.																		.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	P	G	V	S	K	Y	D	L	A	A	G	R	S	H	I	E	G	A	S	K	Q	S	D	F	V	Q	A	G	Y	Q	Y	G
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	L	N	L	A	V	V	G	S	E	D	G	T	D	M	D	Y	N	D	S	I	V	I	L	N	W	P	L	G
Template Known Secondary structure		.	.	.	.	.	T											S	S	S				B	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions