|   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | Q | L | A | N | Q | I | A | A | G | E | V | V | E | R | P | A | S | V | V | K | E | L | V | E | N | S | L | D | A | G | A | T | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | D | I | D | I | E | R | G | G | A | K | L | I | R | I | R | D | N | G | C | G | I | K | K | D | E | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |
|
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   | . |   |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|
Template Sequence |   |
E | I | A | Q | L | M | S | L | I | I | N | T | F | Y | S | N | K | E | I | F | L | R | E | L | I | S | N | S | S | D | A | L | D | K | I | R | Y | E | S | L | T | D | P | S | K | L | D | S | G | K | E | L | H | I | N | L | I | P | N | K | Q | D | R | . |
T | L | T | I | V | D | T | G | I | G | M | T | K | A | D | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | S |
|
| S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | G | T | T |
|
|
|
|
|  |  |  |  |  |  | T | T | T | T | . |  |  |  |  |  |  |
| S |
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
69 | 70 | . | . | . | . | . | . | . | . | |
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | |
. | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | A | L | A | R | H | A | T | S | . |
. |
. |
. |
K | I | A | S | L | D | D | L | E | A | I | I | S | L | G | F | R | G | E | A | L | A | S | I | S | S | V | S | R | . |
L | T | L | T | S | R | T | A | E | Q | . |
Q | E | A | W | Q | A | Y | A | E | G | R | D | M | N | V | T | V | K | P | A | A | H | P | V | G |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
| . | . | . | . |
|
|   |   |   |   |
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |
|
|   | . |
|   |
|   |
|
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
I | N | N | L | G | T | I | A | K | S | G | T | K | A | F | M | E | A | L | Q | A | G | A | D | I | S | M | I | G | Q | F | G | V | G | F | Y | S | A | Y | L | V | A | E | K | V | T | V | I | T | K | H | N | D | D | E | Q | Y | A | W | E | S | S | A | G | G | S | F | T | V | R | T | D | T | G | E | P | M | G | R | G |
Template Known Secondary structure |   |
 | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| G | G | G | G | G | G | G | T |
| G | G | G | G | G | G | G | T |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |
|
| S | S |
|
| S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | |
180 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | L | E | V | L | D | L | F | Y | N | T | P | A | R | R | K | F | L | R | T | E | K | T | E | F | N | H | I | D | E | I | I | R | R | I | A | . |
L | A | R | F | D | V | T | I | N | L |
Query Conservation |   |
|   |
|   |
|   |   |
|
|   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
| . |
|   |   |
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
| . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |
Template Sequence |   |
T | K | V | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | L | K | E | D | Q | T | E | Y | L | E | E | R | R | I | K | E | I | V | K | K | H | S | Q | F | I | G | Y | P | I | T | L | F | V |
Template Known Secondary structure |   |
 |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
| G | G | G | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | S |
|  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . |
  |