Job Description P76208 Confidence 4.49% Date Thu Jan 5 12:20:33 GMT 2012 Rank 49 Aligned Residues 85 % Identity 15% Template d1oedb_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.										.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		W	V	I	F	I	P	A	L	I	S	T	L	I	S	L	L	K	F	M	N	T	R	Q	E	N	K	E	G	I	N	A	V	M	L	D	F	T	H	V	M	I	D	M	M	Q	A	.	.	.	.	.	.	.	.	.	N	T	P	F	L	N	L	F	W	Y	N	S	P	T	P	N	F	N	G	G	V	N	V	M	F
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence																						.																										.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	T	I	I	P	C	I	L	I	S	I	L	A	I	L	V	F	Y	L	.	P	P	D	A	G	E	K	M	S	L	S	I	S	A	L	L	A	V	T	V	F	L	L	L	L	A	D	K	V	P	E	T	S	L	S	V	P	I	I	I	R	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure																						.					G	G	G																													S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.																	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	V	I	F	I	L	I	F	V	G	L	A	L	Q	D	S	G	A	R	M	S	R	Q	A	R	F	L	R	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	I	M	I	L	V	A	F	S	V	I	L	S	V	V	V	L	N	L	H	H	R	S	A	M	V	A	D	R	L
Template Known Secondary structure																								T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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