Job Description P67080 Confidence 100.00% Date Thu Jan 5 12:10:23 GMT 2012 Rank 7 Aligned Residues 214 % Identity 18% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.	.	.	.					.
Query SS confidence																																.	.	.	.					.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	.	.	.	.	T	K	P	A	.	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F
Query Conservation																																.	.	.	.					.
Alig confidence																		.	.	.	.											.	.	.	.					.																																	.	.	.	.	.
Template Conservation																		.	.	.	.																																																				.	.	.	.	.
Template Sequence		D	L	D	A	V	R	A	N	V	R	A	L	R	A	R	A	.	.	.	.	P	R	S	A	L	M	A	V	V	K	S	N	A	Y	G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	W	L	G	T	A	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	G	.	.	.	.	.	R	I	M	C
Template Known Secondary structure															T	T	S	.	.	.	.	T	T	S												T	T													T							S	S										T	T			S	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		I	G	P	L	Q	S	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	.	.	.	E	L	P	R	L
Query Conservation																																																																										.	.	.
Alig confidence																	.																															.						.	.																			.	.	.
Template Conservation																	.																															.						.	.
Template Sequence		W	L	W	T	P	G	G	P	W	R	E	A	I	E	T	.	D	I	D	V	S	V	S	G	M	W	A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	.	A	D	T	G	L	.	.	G	R	N	G	C	Q	P	A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	E	G	T	V
Template Known Secondary structure						T	T									T	.	T							S															T	S							.			S	S		.	.		S	S	S																			T	T	S
Template Predicted Secondary structure																	.																															.						.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	L	R	G	L	M	A	I	P	A	P	E	S	E	Y	V	R	.	.	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	D	M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D	Y	S	K
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		Q	V	T	G	V	W	S	H	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K	E	G	V	D	P	E	V	R	H	I	A	N	S	P	A	T	L	T	L	P	E	T	H	F	D	L	V	R	T	G	L	A	V	Y	G	V	S	P	S	P	E
Template Known Secondary structure											S	S	T	T	S	T	T																					T	T				S														G	G	G		S	S						G	G	G	G	T			S		G	G
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions