Job Description P67080 Confidence 99.87% Date Thu Jan 5 12:10:23 GMT 2012 Rank 35 Aligned Residues 180 % Identity 12% Template d1f3ta2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		M	N	D	I	A	H	N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W
Query Conservation																																									.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.														.													.																						.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.																											.																						.	.	.	.
Template Sequence		L	G	D	I	V	R	K	H	E	T	W	K	K	C	L	.	.	.	.	.	.	.	.	.	.	.	P	R	V	T	P	F	Y	A	V	K	C	N	D	D	W	R	V	L	G	T	L	A	A	L	G	T	.	G	F	D	C	A	S	N	T	E	I	Q	R	V	R	G	I	G	V	P	P	E	.	.	.	.	K	I
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	T	T							G	G	G													T	T		.						S										T	T			G	G	.	.	.	.	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.																											.																						.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.
		80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		H	F	I	G	P	L	Q	S	.	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L
Query Conservation										.
Alig confidence										.																																.	.	.	.	.	.										.	.																					.
Template Conservation																																										.	.	.	.	.	.										.	.																					.
Template Sequence		I	Y	A	N	P	C	K	Q	I	S	H	I	R	Y	A	R	D	S	G	V	D	V	M	T	F	D	C	V	D	E	L	E	K	V	A	K	T	H	P	K	.	.	.	.	.	.	A	K	M	V	L	R	I	S	T	.	.	V	K	F	G	A	K	V	E	D	C	R	F	I	L	E	Q	A	K	K	L	.	N	I
Template Known Secondary structure						S	S												T	T								S												T	T	.	.	.	.	.	.							B			.	.			S		B															T	.	T
Template Predicted Secondary structure																																										.	.	.	.	.	.										.	.																					.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.							.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.
		159	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		R	L	R	G	L	M	A	I	P	A	P	E	.	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	V	T	G	V	S	F	H	V	G	S	G	S	T	D	A	S	T	F	A	Q	A	I	S	D	S	R	F	V	F	D	M	G	T	E	L	G	F	N	M	H	I	L	D	I	G	G	G
Template Known Secondary structure												S			S		T																				T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions