Job Description P67080 Confidence 80.71% Date Thu Jan 5 12:10:23 GMT 2012 Rank 66 Aligned Residues 189 % Identity 10% Template c3qz6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:hpch/hpai aldolase; PDBTitle: the crystal structure of hpch/hpai aldolase from desulfitobacterium2 hafniense dcb-2 Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																										.														.									.	.	.	.	.	.
Query SS confidence																										.														.									.	.	.	.	.	.
Query Sequence		V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	.	S	K	T	K	P	A	S	A	I	A	E	A	I	.	D	A	G	Q	R	Q	F	G	.	.	.	.	.	.	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I
Query Conservation																										.														.									.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.									.														.									.	.	.	.	.	.																					.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.																																																										.	.
Template Sequence		L	K	K	K	L	S	.	.	.	.	.	.	.	.	.	.	A	G	K	S	V	V	G	T	X	L	N	L	V	Y	N	P	D	I	V	R	I	Y	A	E	A	G	L	D	Y	F	I	V	D	C	E	H	A	A	Y	T	F	R	E	I	N	H	L	V	S	V	A	K	N	A	G	V	S	.	.	V	L	V	R	I
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	T	T									S	S				T	T								T	T		S						S	S	S	S																		T			.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																																																										.	.
Template SS confidence
		3	.	.	.	.	.											.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70
		83	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.																												.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure																.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	P	L	Q	S	N	K	S	R	L	V	A	E	H	.	.	.	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S
Query Conservation																.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																																																																	.
Template Sequence		P	Q	V	D	R	A	H	V	Q	R	L	L	D	I	G	A	E	G	F	X	I	P	G	V	Q	S	A	E	T	X	R	E	T	V	R	L	A	K	Y	P	P	L	G	E	R	G	V	G	G	S	I	V	T	D	F	K	P	V	N	W	A	E	W	V	Q	E	R	N	D	E	I	F	I	X	A	Q	I	E	H	.
Template Known Secondary structure		S	S													T							T	T			S												S		T	T	T								G	G	G	G	T	T														T	T										.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R	G	L	M	A	I	.	.	.	.	.	P	A	P	E	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	D
Query Conservation																																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	V	K	A	V	E	D	I	D	S	I	L	A	V	Q	G	V	D	A	V	I	F	G	P	R	D	L	S	N	D	L	G	I	I	G	Q	T	E	H	P	.	K	V	Y	E	C	Y	E	K	V	Y	R	A	A	D	R	Q	G	V	V	K	G	F	F	T	A	A	D	A	A	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.						T						T	S	T	T															T	T		T	T		T	T			.																	T								S	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
												150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	G	W	A	V	E	R	G	A	Q	X	L	L	W	S	G
Template Known Secondary structure		G						T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions