Job Description P67080 Confidence 100.00% Date Thu Jan 5 12:10:23 GMT 2012 Rank 16 Aligned Residues 207 % Identity 13% Template c3oo2B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:alanine racemase 1; PDBTitle: 2.37 angstrom resolution crystal structure of an alanine racemase2 (alr) from staphylococcus aureus subsp. aureus col Resolution 2.37 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.	.	.	.					.
Query SS confidence																																.	.	.	.					.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	.	.	.	.	T	K	P	A	.	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F
Query Conservation																																.	.	.	.					.
Alig confidence																		.	.	.	.											.	.	.	.					.																																	.	.	.	.	.
Template Conservation																		.	.	.	.																																																				.	.	.	.	.
Template Sequence		D	L	N	A	V	A	S	N	F	K	V	F	S	T	L	H	.	.	.	.	P	N	K	T	V	M	A	V	V	K	A	N	A	Y	G	L	G	S	V	K	V	A	R	H	L	M	E	N	G	A	T	F	F	A	V	A	T	L	D	E	A	I	E	L	R	M	H	G	I	T	A	.	.	.	.	.	K	I	L	V
Template Known Secondary structure																	S	.	.	.	.	T	T	S												T	T											T	T	T							S	S										T	T			S	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																																																				.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	P	L	Q	S	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R
Query Conservation
Alig confidence																	.																.	.	.																								.
Template Conservation																	.																.	.	.																								.
Template Sequence		L	G	V	L	P	A	K	D	I	D	K	A	I	Q	H	.	R	V	A	L	T	V	P	S	K	Q	W	L	K	E	A	.	.	.	I	K	N	I	S	K	K	L	W	L	H	I	K	L	D	T	G	M	G	R	L	G	I	.	K	D	T	K	T	Y	Q	E	V	I	E	I	I	Q	Q	Y	E	Q	L	V	F	E
Template Known Secondary structure			S				G	G	G							T	.	T		B													.	.	.	T	T	S											B			S	S		S	S	S	B	.																	T	T
Template Predicted Secondary structure																	.																.	.	.																								.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	M	A	I	P	A	P	E	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	D	M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		G	V	F	T	H	F	A	C	A	D	E	P	G	D	M	.	.	.	T	T	E	Q	Y	Q	R	F	K	D	M	V	N	E	A	I	K	P	E	Y	I	H	C	Q	N	S	A	G	S	L	L	M	D	C	Q	F	C	N	A	I	R	P	G	I	S	L	Y	G	Y	Y	P
Template Known Secondary structure								S		T	T	S		S	S		.	.	.													T	T	S				S																S	S								G	G	G	G	T			S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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