Job Description P67080 Confidence 99.63% Date Thu Jan 5 12:10:23 GMT 2012 Rank 46 Aligned Residues 196 % Identity 13% Template c3nzpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:arginine decarboxylase; PDBTitle: crystal structure of the biosynthetic arginine decarboxylase spea from2 campylobacter jejuni, northeast structural genomics consortium target3 br53 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																								.														.	.	.
Query SS confidence																																								.														.	.	.
Query Sequence		N	D	I	A	H	N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	.	.	.	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L
Query Conservation																																								.														.	.	.
Alig confidence																								.																.														.	.	.																						.	.	.	.
Template Conservation																								.																																																						.	.	.	.
Template Sequence		H	L	I	Q	K	Q	I	E	N	I	Y	G	N	F	N	K	A	R	K	E	F	G	.	Y	K	G	G	F	N	A	V	Y	P	L	K	V	N	Q	Y	P	G	F	V	K	N	L	V	K	L	G	K	D	Y	N	Y	G	L	E	A	G	S	K	A	E	L	L	L	A	X	A	Y	N	N	E	G	A	.	.	.	.
Template Known Secondary structure																						T	T	.			S								G	G	G														T	G	G	G	T							S											S		T	T	S	.	.	.	.
Template Predicted Secondary structure																								.																																																						.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																					.	.	.	.																							.
Query SS confidence																					.	.	.	.																							.
Query Sequence		E	W	H	F	I	G	P	L	Q	S	N	K	S	R	L	V	A	E	H	.	.	.	.	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	.	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V
Query Conservation																					.	.	.	.																							.
Alig confidence																					.	.	.	.																							.																.	.
Template Conservation																																																															.	.
Template Sequence		P	I	T	V	N	G	F	K	D	R	E	L	I	N	I	G	F	I	A	A	E	X	G	H	N	I	T	L	T	I	E	G	L	N	E	L	E	A	I	I	D	I	A	K	E	R	F	K	P	K	P	N	I	G	L	R	V	R	L	H	S	.	.	A	K	F	G	L	T	S	T	E	L	I	E	A	V	N	L	L
Template Known Secondary structure							S																T	T								S	S												T	T	S		S									B			T	T	.	.				S	B
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		153	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure								.													.																									.
Query SS confidence								.													.																									.
Query Sequence		A	E	L	P	R	L	.	R	L	R	G	L	M	A	I	P	A	P	E	.	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	.	P	H	I	D	T	L	S	L	G	M
Query Conservation								.													.																									.
Alig confidence								.													.																									.
Template Conservation
Template Sequence		K	E	N	K	L	L	E	Q	F	T	X	I	H	F	H	L	G	S	Q	I	T	E	I	H	P	L	K	K	A	L	N	E	A	G	N	I	Y	T	E	L	R	K	X	G	A	K	N	L	K	A	I	N	L	G	G
Template Known Secondary structure				T	T		T	T	T										S		B			S																				T	T		T	T								S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions