Job Description P67080 Confidence 100.00% Date Thu Jan 5 12:10:23 GMT 2012 Rank 23 Aligned Residues 213 % Identity 16% Template c3llxA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:predicted amino acid aldolase or racemase; PDBTitle: crystal structure of an ala racemase-like protein (il1761) from2 idiomarina loihiensis at 1.50 a resolution Resolution 1.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I	G	P	L	Q
Query Conservation
Alig confidence																					.	.																																													.	.	.	.	.	.
Template Conservation																					.	.																																													.	.	.	.	.	.
Template Sequence		D	E	A	K	L	K	S	N	I	N	Y	L	K	Q	R	V	E	S	L	.	.	G	S	H	L	R	P	H	L	T	L	R	T	L	E	A	A	G	Y	L	L	D	S	K	S	A	P	A	T	V	S	T	L	A	E	A	E	A	Y	A	K	A	G	Y	T	.	.	.	.	.	.	D	L	L	Y	A	V	G	I	A
Template Known Secondary structure																				T	.	.	T			B			B					B									S	S	T	T	S					S	S										T	T			.	.	.	.	.	.
Template Predicted Secondary structure																					.	.																																													.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90
		87	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		S	N	K	S	R	L	V	A	E	H	.	.	.	.	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R	G
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.																																						.	.										.	.
Template Conservation																																																					.	.										.	.
Template Sequence		P	A	K	L	K	R	V	A	A	L	R	Q	Q	G	I	N	L	H	I	L	L	D	N	I	T	Q	A	Q	A	V	V	D	Y	A	A	E	F	G	Q	D	F	S	V	F	I	E	I	D	S	D	D	.	.	H	R	G	G	I	K	P	S	D	.	.	S	K	L	L	T	I	A	K	T	L	G	E	H	F	T	G
Template Known Secondary structure		G	G	G										T	T									S															T									B		S	S	S	.	.	S	S	S		B		T	T		.	.	T										G	G	G
Template Predicted Secondary structure																																																					.	.										.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.			.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure										.	.	.	.	.	.	.																																													.
Query SS confidence										.	.	.	.	.	.	.																																													.
Query Sequence		L	M	A	I	P	A	P	E	.	.	.	.	.	.	.	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	D	M	E	A	A	I	A	A	.	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D	Y
Query Conservation										.	.	.	.	.	.	.																																													.
Alig confidence										.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		L	X	T	H	A	G	G	S	Y	A	C	N	T	E	Q	G	L	K	N	F	A	K	Q	E	C	D	A	V	R	I	A	R	N	N	L	E	T	A	G	I	H	C	A	I	T	S	V	G	S	T	P	T	A	H	F	G	E	D	F	S	D	I	S	E	V	R	A	G	V	Y	T	T	F	D	L	V	X
Template Known Secondary structure							G	G	G	G	G			S																									T	T																		S			T	T		S						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions