Return to main results Retrieve Phyre Job Id

Job DescriptionP67080
Confidence61.70%DateThu Jan 5 12:10:23 GMT 2012
Rank78Aligned Residues115
% Identity13%Templatec3kruC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160... ......170.........180....
Predicted Secondary structure 




















....







Query SS confidence 






















































. . . .




















Query Sequence  ATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRLRGL. . . . MAIPAPESEYVRQFEVARQMA
Query Conservation     
   
   
    
 
 




 
   
    
       
     
 
 

.... 

    
             
Alig confidence 






















.





















..






....




















Template Conservation   


 


 


 
  
 


  . 
    
   

       
  ..


 
 

 
                    

Template Sequence  IEVIDEVRKNWPENKPIFVRVSA. DDYMEGGINIDMMVEYINMIKD. . KVDLIDVSSGGLLNVDINLYPGYQVKYAETIK
Template Known Secondary structure  TS
TTS

.

SSTTS

TT..T
S


SS






TTTT
Template Predicted Secondary structure 




.







..



















Template SS confidence 















































































   197..200.........210......... 220.........230.........240. ........250.........260.........270...
 
   185....190.........200.........210. .... ....220.........230....
Predicted Secondary structure 










...

.











Query SS confidence 


























. . .



.


















Query Sequence  VAFAGLKTRYPHIDTLSLGMSDDMEAA. . . IAAG. STMVRIGTAIFGARDYSKK
Query Conservation       
         

 
 
     
...   
.   

 
  


   
   
Alig confidence 


........















...



.


















Template Conservation     ........ 



  


   
 
   
  
  
 
 


  



 
  
Template Sequence  KRC. . . . . . . . NIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLH
Template Known Secondary structure  ........T

SS


TTS
SS
TT
Template Predicted Secondary structure 
........















Template SS confidence 





















































   274.. ...280.........290.........300.........310.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions