Job Description P67080 Confidence 100.00% Date Thu Jan 5 12:10:23 GMT 2012 Rank 24 Aligned Residues 219 % Identity 12% Template c3gwqB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-serine deaminase; PDBTitle: crystal structure of a putative d-serine deaminase (bxe_a4060) from2 burkholderia xenovorans lb400 at 2.00 a resolution Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I	G	P	L
Query Conservation																																			.
Alig confidence																					.	.													.																																					.	.
Template Conservation																					.	.																																																		.	.
Template Sequence		Y	A	D	R	V	E	H	N	L	K	W	X	Q	A	F	V	A	E	Y	.	.	G	V	K	L	A	P	H	G	K	T	T	X	A	P	Q	L	F	R	R	Q	L	E	T	G	A	W	G	I	T	L	A	T	A	H	Q	V	R	A	A	Y	H	G	G	V	S	R	V	L	X	.	.	A	N	Q	L	V	G	R	R
Template Known Secondary structure																			S	S	.	.	S						B		T	T	T												T	T							S	S										T	T							.	.						S
Template Predicted Secondary structure																					.	.																																																		.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.
Predicted Secondary structure															.	.																																																											.
Query SS confidence															.	.																																																											.
Query Sequence		Q	S	N	K	S	R	L	V	A	E	H	F	D	.	.	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	.	R	L	R	L	R	G
Query Conservation															.	.																																																											.
Alig confidence															.	.																																										.																	.
Template Conservation																																																										.
Template Sequence		N	X	X	X	V	A	E	L	L	S	D	P	E	F	E	F	F	C	L	V	D	S	V	E	G	V	E	Q	L	G	E	F	F	K	S	V	N	K	Q	L	Q	V	L	L	E	L	G	V	P	G	G	R	T	G	V	R	.	D	A	A	Q	R	N	A	V	L	E	A	I	T	R	Y	P	D	T	L	K	L	A	G
Template Known Secondary structure								T	T	T	T		T	T																							T	T												T	T	S	S	S	S	B		.	S													T	S	T	T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		L	M	A	I	P	A	P	E	S	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	.	.	.	Y	P	H	I	D	T	L	S	L	G	M	S	D	D	M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.
Template Conservation
Template Sequence		V	E	L	Y	E	G	V	L	K	E	E	H	E	V	R	E	F	L	Q	S	A	V	A	V	T	R	E	L	V	E	Q	E	R	F	A	R	A	P	A	V	L	S	G	A	G	S	A	W	Y	D	V	V	A	E	E	F	V	K	A	S	E	T	G	K	V	E	V	V	L	R	P
Template Known Secondary structure						G	G	G			S																					T	T			S	S	S	S								S	T	T													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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