Job Description P67080 Confidence 39.03% Date Thu Jan 5 12:10:23 GMT 2012 Rank 95 Aligned Residues 173 % Identity 13% Template c2v82A_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal Resolution 2.1 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure															.	.	.	.																		.
Query SS confidence															.	.	.	.																		.
Query Sequence		E	E	I	T	L	L	A	V	S	K	T	K	P	.	.	.	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	.	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I	G	P	L	Q	S	N	K	S	R	L	V	A	E	H	F	D	W	C	H
Query Conservation															.	.	.	.																		.
Alig confidence															.	.	.	.																		.
Template Conservation
Template Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	X	G	C	Q	L	I
Template Known Secondary structure		S	S	S							T	T																	T								T	T	S	T	T													T	T	T	S									S										T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R	G	L	M	A	I	P	A	P	E	S	E	Y	V	R	Q	F	E	V	A	R
Query Conservation
Alig confidence									.	.																.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.																.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	P	N	I	H	S	.	.	E	V	I	R	R	A	V	G	Y	G	X	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	.	.	.	.	.	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S				.	.									T	T						.	.	.	.	.	.	.	.	.	.	.	.				S										T	.	.	.	.	.	T		S					T	T						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.																.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	.	.	D	M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D
Query Conservation																											.	.
Alig confidence		.																									.	.
Template Conservation		.
Template Sequence		.	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q
Template Known Secondary structure		.									T	T	S		T	T							S	S			T	T	T								T		S						T	T	T			T	T
Template Predicted Secondary structure		.
Template SS confidence
			135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions