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Job DescriptionP67080
Confidence100.00%DateThu Jan 5 12:10:23 GMT 2012
Rank20Aligned Residues206
% Identity11%Templatec2rjgC_
PDB info PDB header:isomeraseChain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of biosynthetic alaine racemase from escherichia2 coli
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...... ...40.........50.........60.........70.........80..
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Query Sequence  NLAQVRDKISAAATRCGRSPEEITLLAVSK. . . . TKPASAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFI
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Template Sequence  NRRALRHNLQRLRELA. . . . PASKMVAVVKANAYGHGLLETARTLP. DADAFGVARLEEALRLRAGGITKP. . . . VLLLE
Template Known Secondary structure  S....TTS
T
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   910.........20.... .....30.........40.........50 .........60.........70.... .....
 
   83......90.........100.........110.........120.........130.........140.........150........ .160.
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Query Sequence  GPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRL. RLR
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Template Sequence  GFFDARDLPTISAQ. HFHTAVHNEEQLAALEEAS. . . LDEPVTVWMLDTGM. . HRLGVRPEQAEAFYHRLTQCKNVRQPV
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GGGT.T

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   80.........90... ......100.........110.. .......120...... ...130.........140.........150...
 
   162.......170.... .....180.........190.........200.........210.........220.........230...
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Query Sequence  GLMAIPAPESEYV. . RQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSK
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Template Sequence  NIVSHFARADEPKCGATEKQLAIFNTFCEGK. . . . . . PGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLED
Template Known Secondary structure  B


SSTT
TTSTTT
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GGG
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   155....160.........170.........180..... ....190.........200.........210.........220..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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