Job Description P67080 Confidence 99.85% Date Thu Jan 5 12:10:23 GMT 2012 Rank 36 Aligned Residues 182 % Identity 15% Template c2pljA_ PDB info PDB header:lyase Chain: A: PDB Molecule:lysine/ornithine decarboxylase; PDBTitle: crystal structure of lysine/ornithine decarboxylase complexed with2 putrescine from vibrio vulnificus Resolution 1.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I	G	P	L
Query Conservation																																			.
Alig confidence																		.	.	.	.														.													.																						.	.	.	.
Template Conservation																		.	.	.	.																											.																						.	.	.	.
Template Sequence		D	C	D	V	I	R	Q	Q	Y	R	A	L	K	N	A	L	.	.	.	.	P	N	V	T	L	H	Y	A	L	K	P	L	P	H	P	V	V	V	R	T	L	L	A	E	G	A	.	S	F	D	L	A	T	T	G	E	V	E	L	V	A	S	E	G	V	P	A	D	.	.	.	.	L	T	I	H	T	H	P	I
Template Known Secondary structure																	S	.	.	.	.	T	T							S	T	T														T		.						S										T	T			G	G	.	.	.	.	G						S	S
Template Predicted Secondary structure																		.	.	.	.																											.																						.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.
			86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	S	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R	G	L	M
Query Conservation		.
Alig confidence		.																												.	.	.	.																.		.	.																				.
Template Conservation																														.	.	.	.																.		.	.																				.
Template Sequence		K	R	D	A	D	I	R	D	A	L	A	Y	G	C	N	V	F	V	V	D	N	L	N	E	L	E	K	F	.	.	.	.	K	A	Y	R	D	D	V	E	L	L	V	R	L	S	F	.	S	.	.	K	K	F	G	C	S	P	E	Q	A	L	V	I	I	E	T	A	K	E	.	W	N	I	R	I	K	G	L	S
Template Known Secondary structure														T								S						T	T	.	.	.	.	G	G	G	T	T	T							B			.		.	.			S		B															.	T	T
Template Predicted Secondary structure																														.	.	.	.																.		.	.																				.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.
		165	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure									.																							.
Query SS confidence									.																							.
Query Sequence		A	I	P	A	P	E	S	.	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	.	Y	P	H	I	D	T	L	S	L	G	M	S
Query Conservation									.																							.
Alig confidence									.																							.
Template Conservation
Template Sequence		F	H	V	G	S	Q	T	T	N	P	N	K	Y	V	E	A	I	H	T	C	R	H	V	M	E	Q	V	V	E	R	G	L	P	A	L	S	T	L	D	I	G	G	G
Template Known Secondary structure						T	T				T																				T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions