Job Description P67080 Confidence 100.00% Date Thu Jan 5 12:10:23 GMT 2012 Rank 21 Aligned Residues 206 % Identity 17% Template c2odoC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:alanine racemase; PDBTitle: crystal structure of pseudomonas fluorescens alanine racemase Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	.	.	.	.	T	K	P	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I
Query Conservation																																.	.	.	.
Alig confidence																			.	.	.	.	.	.								.	.	.	.																																						.	.	.	.
Template Conservation																			.	.	.	.	.	.																																																	.	.	.	.
Template Sequence		D	L	Q	A	L	R	H	N	Y	Q	L	A	R	E	V	T	G	.	.	.	.	.	.	A	K	A	L	A	V	I	A	D	A	Y	G	H	G	A	V	R	C	A	Q	A	L	E	A	E	A	D	G	F	A	V	A	C	I	E	E	A	L	E	L	R	A	A	G	I	R	A	P	.	.	.	.	I	L	L	L	E
Template Known Secondary structure																			.	.	.	.	.	.	S												T										G	G	G		S					S	S										T	T			S		.	.	.	.				T	T
Template Predicted Secondary structure																			.	.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.							.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	L	Q	S	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	A	A	A	V	A	E	L	P	R	L	R	L	R	G
Query Conservation
Alig confidence																.																			.	.	.																.	.
Template Conservation																.																			.	.	.																.	.
Template Sequence		G	F	F	E	A	D	E	L	P	L	I	V	E	H	.	D	F	W	C	V	V	H	S	L	W	Q	L	D	A	I	E	Q	A	.	.	.	R	L	A	K	P	I	H	V	W	L	L	D	S	G	M	.	.	H	R	V	G	L	H	P	N	D	Y	K	A	A	Y	Q	R	L	Q	A	S	A	N	V	A	K	I	V
Template Known Secondary structure				S	S	G	G	G							T	.	T							S										S	.	.	.			S	S									S	S	S	.	.		S	S																T	S	S	S
Template Predicted Secondary structure																.																			.	.	.																.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		163	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	M	A	I	P	A	P	E	S	E	.	.	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S	D	D	M	E	A	A	I	A	A	G	S	T	M	V	R	I	G	T	A	I	F	G	A	R	D	Y	S	K	K
Query Conservation												.	.
Alig confidence												.	.																			.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		L	M	S	H	F	A	R	A	D	E	L	D	C	T	R	S	V	E	Q	V	A	V	F	L	G	A	R	A	D	L	.	.	.	.	.	.	T	A	E	I	S	L	R	N	S	P	A	V	L	G	W	P	R	V	P	S	D	W	V	R	P	G	L	M	L	Y	G	S	S	P	F	D	E	P
Template Known Secondary structure							S	S	T	T		S	S																T	T		.	.	.	.	.	.																T	T	S			S					S	G	G	G	G	T					S	S
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions