Job Description P67080 Confidence 99.85% Date Thu Jan 5 12:10:23 GMT 2012 Rank 37 Aligned Residues 190 % Identity 15% Template c2o0tB_ PDB info PDB header:lyase Chain: B: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: the three dimensional structure of diaminopimelate decarboxylase from2 mycobacterium tuberculosis reveals a tetrameric enzyme organisation Resolution 2.33 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	L	A	Q	V	R	D	K	I	S	A	A	A	T	R	C	G	R	S	P	E	E	I	T	L	L	A	V	S	K	T	K	P	.	A	S	A	I	A	E	A	I	D	A	G	Q	R	Q	F	G	E	N	Y	V	Q	E	G	V	D	K	I	R	H	F	Q	E	L	G	V	T	G	L	E	W	H	F	I	G	P	L
Query Conservation																																			.
Alig confidence																			.	.	.									.					.													.																						.	.	.	.
Template Conservation																			.	.	.									.																		.																						.	.	.	.
Template Sequence		D	E	D	D	F	R	S	R	C	R	E	T	A	A	A	F	G	.	.	.	S	G	A	N	V	H	Y	A	.	A	A	F	L	C	S	E	V	A	R	W	I	S	E	E	G	L	.	C	L	D	V	C	T	G	G	E	L	A	V	A	L	H	A	S	F	P	P	E	.	.	.	.	R	I	T	L	H	G	N	N
Template Known Secondary structure																	T	T	.	.	.	S	G	G	G	B				.																T		.						S										T	T			G	G	.	.	.	.	G						S	S
Template Predicted Secondary structure																			.	.	.									.																		.																						.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.
		86	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.													130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150
Predicted Secondary structure				.																																											.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence				.																																											.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		Q	S	.	N	K	S	R	L	V	A	E	H	F	D	W	C	H	T	I	D	R	L	R	I	A	T	R	L	N	D	Q	R	P	A	E	L	P	P	L	N	V	L	I	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	N	I	S	D	E	N	S	K	S	G	I	Q	L	A	E	L	D	E	L	.	.	A	A
Query Conservation				.																																											.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence				.																																											.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		K	S	V	S	E	L	T	A	A	V	K	A	G	V	G	H	I	V	V	D	S	M	T	E	I	E	R	L	D	A	I	A	G	E	A	G	I	V	Q	D	V	L	V	R	L	T	V	G	V	E	A	H	T	H	E	F	I	S	T	A	H	E	D	Q	K	F	G	L	S	V	A	S	G	A	A	M	A	A	V	R
Template Known Secondary structure														T		S						S															T												S						T						S	S			S	S	S	S			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																							.																				.	.	.	.	.
Query SS confidence																							.																				.	.	.	.	.
Query Sequence		A	V	A	E	L	P	R	L	R	L	R	G	L	M	A	I	P	A	P	E	S	.	E	Y	V	R	Q	F	E	V	A	R	Q	M	A	V	A	F	A	G	L	.	.	.	.	.	K	T	R	Y	P	H	I	D	T	L	S	L	G	M	S
Query Conservation																							.																				.	.	.	.	.
Alig confidence																							.																				.	.	.	.	.
Template Conservation
Template Sequence		R	V	F	A	T	D	H	L	R	L	V	G	L	H	S	H	I	G	S	Q	I	F	D	V	D	G	F	E	L	A	A	H	R	V	I	G	L	L	R	D	V	V	G	E	F	G	P	E	K	T	A	Q	I	A	T	V	D	L	G	G	G
Template Known Secondary structure							S	S																	S																										S	T	T
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions