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Job DescriptionP67080
Confidence100.00%DateThu Jan 5 12:10:23 GMT 2012
Rank15Aligned Residues216
% Identity17%Templatec1vftA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of l-cycloserine-bound form of alanine2 racemase from d-cycloserine-producing streptomyces3 lavendulae
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...... ...40 .........50.........60.........70.........80.
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Query Sequence  NLAQVRDKISAAATRCGRSPEEITLLAVSK. . . . TKPA. SAIAEAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHF
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Template Sequence  DLDAVRANVRALRARA. . . . PRSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQG. . . . . RIMC
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   13......20........ .30.........40.........50.........60.........70......... 80...
 
   82.......90.........100.........110.........120.........130.........140 .........150.........160
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Query Sequence  IGPLQSNKSRLVAEHFDWCHTIDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGI. QLAELDELAAAVAELPRLRL
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Template Sequence  WLWTPGGPWREAIET. DIDVSVSGMWALDEVRAAARAAGRTARIQ. LADTGLGRNGCQPADWAELVGAAVAAQAEGTVQV
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   84.....90........ .100.........110.........120....... ..130.........140.........150.........160.
 
   161........170... ......180.........190.........200.........210.........220.........230...
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Query Sequence  RGLMAIPAPESEY. . VRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTMVRIGTAIFGARDYSK
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Template Sequence  TGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSPE
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   163......170.........180.........190.........200.........210.........220.........230.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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