 |
Job Description | P60906 | Confidence | 99.72% | Date | Thu Jan 5 12:07:14 GMT 2012 |
Rank | 68 | Aligned Residues | 93 |
% Identity | 26% | Template | d1qe0a1 |
SCOP info | Anticodon-binding domain-like
| Class II aaRS ABD-related
| Anticodon-binding domain of Class II aaRS
|
Resolution | 2.70 |
|
 |
  |   |
327 | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | V | D | I | Y | L | V | A | S | G | A | D | T | Q | S | A | A | M | A | L | A | E | R | L | R | D | E | L | P | G | V | K | L | M | T | N | H | G | G | G | N | F | K | K | Q | F | A | R | A | D | K | W | G | A | R | V | A | V | V | L | G | E | S | E | V | A | N | G | T | A | V | V | K | D | L | R | S | G | E |
Query Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |   | . | . |
|
|   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |
Template Sequence |   |
E | N | L | D | L | F | I | V | T | M | G | D | Q | A | D | R | Y | A | V | K | L | L | N | H | L | R | H | N | . |
. |
G | I | K | A | D | K | D | Y | L | Q | R | K | I | K | G | Q | M | K | Q | A | D | R | L | G | A | K | F | T | I | V | I | G | D | Q | E | L | E | N | N | K | I | D | V | K | N | M | T | T | G | E |
Template Known Secondary structure |   |
|
|
| S |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | T |
|
|  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|  |  |  |  |  |  | T |
|  |  |  |  |  | T | T | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | |
|
. | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . |
  |
  |   |
407 | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . |
Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | T | A | V | A | Q | D | S | V | A | A | H | L | R | T |
Query Conservation |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|
Template Sequence |   |
S | E | T | I | E | L | D | A | L | V | E | Y | F | K | K |
Template Known Secondary structure |   |
 |  |  |  |
| T | T |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|