Job Description P60906 Confidence 100.00% Date Thu Jan 5 12:07:14 GMT 2012 Rank 8 Aligned Residues 361 % Identity 22% Template c3od1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:atp phosphoribosyltransferase regulatory subunit; PDBTitle: the crystal structure of an atp phosphoribosyltransferase regulatory2 subunit/histidyl-trna synthetase from bacillus halodurans c Resolution 1.97 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	N	I	Q	A	I	R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R
Query Conservation
Alig confidence																																																								.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		P	F	X	F	E	K	P	F	G	X	R	D	T	L	P	E	W	Y	K	T	K	K	N	I	C	D	Q	X	T	E	E	I	N	L	W	G	Y	D	X	I	E	T	P	T	L	E	Y	Y	E	T	V	G	V	V	.	.	.	.	S	A	I	L	D	Q	Q	L	F	K	L	L	D	Q	Q	G	N	T	L	V	L	R
Template Known Secondary structure				T	T				T	T																										T	T								S				T	T	T					.	.	.	.	S	S	S		G	G	G	S						T	T	S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	G	T	A	G	C	V	R	A	G	I	E	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S	E	H	V
Query Conservation
Alig confidence																																					.	.	.																																									.
Template Conservation																																					.	.	.																																									.
Template Sequence		P	D	X	T	A	P	I	A	R	L	V	A	S	S	L	K	D	R	A	Y	P	L	R	L	A	Y	Q	S	N	V	Y	R	A	Q	Q	.	.	.	G	K	P	A	E	F	E	Q	L	G	V	E	L	I	G	D	G	T	A	S	A	D	G	E	V	I	A	L	X	I	A	A	L	K	R	A	G	L	S	E	.	F
Template Known Secondary structure		S		S													S	S	S		S																.	.	.				S											S			S																		T	T			S	.
Template Predicted Secondary structure																																					.	.	.																																									.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200										.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		T	L	E	L	N	S	I	G	S	L	E	A	R	A	N	Y	R	D	.	.	.	A	L	V	A	F	L	E	Q	H	K	E	K	L	D	E	D	C	K	R	R	M	.	.	.	.	.	.	.	.	.	Y	T	N	P	L	R	V	L	D	S	K	N	P	E	V	Q	A	L	L	N	D	A	P	A	L	G	D	Y	L
Query Conservation																				.	.	.																						.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	A	I	G	H	V	G	Y	V	N	A	L	L	X	D	V	V	G	N	E	Q	R	A	D	R	L	R	R	F	L	Y	E	K	N	Y	V	G	Y	R	E	H	V	K	S	L	N	L	S	T	I	D	K	S	R	L	X	N	L	L	S	L	R	G	G	R	A	A	I	E	E	A	R	G	L	I	Q	T	E	K
Template Known Secondary structure																																		T	T												S	S	S											G	G	G				S									T	T			S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		D	E	E	S	R	E	H	F	A	G	L	C	K	L	L	E	S	A	G	I	A	.	.	Y	T	V	N	Q	R	L	V	R	G	L	D	Y	Y	N	R	T	V	F	E	W	V	T	N	S	L	G	S	Q	G	T	V	C	A	G	G	R	Y	D	G	L	V	E	Q	L	G	G	R	A	T	P	A	V	G	F	A	M
Query Conservation																							.	.
Alig confidence																							.	.																													.	.																.
Template Conservation																																																					.	.																.
Template Sequence		G	K	T	A	L	A	E	X	T	K	L	Y	E	V	L	E	S	Y	G	A	S	E	Y	V	K	F	D	L	T	L	V	L	H	X	S	Y	Y	T	G	V	V	F	E	G	Y	G	N	R	L	G	V	.	.	P	L	C	S	G	G	R	Y	D	E	L	L	S	K	F	.	H	R	P	A	Q	A	T	G	F	G	V
Template Known Secondary structure																			T	T		G	G	G					T	T			S		S	S	S			S								T	T		S	S	.	.									T	T					T	.	T
Template Predicted Secondary structure																																																					.	.																.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	E	R	L	V	L	L	V	Q	A	V	N	P	E	F	K	A	D	P	V	V	D	I	Y	L	V	A	S	G	A	D	T	Q	S	A	A	M	A	L	A	E	R	L	R	D	E	L	P	G	V	K	L	M	T	N	H	G	G	G	N	F	K	K	Q	F	A	R	A	D	K	W	G	A	R	V	A	V
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.																													.	.
Template Sequence		R	I	D	L	L	V	E	A	L	.	.	.	.	.	.	.	.	.	.	N	G	H	E	Q	T	C	I	L	F	S	N	E	R	R	F	E	A	I	E	L	A	R	K	K	R	A	N	.	.	G	E	A	V	V	L	Q	D	L	A	G	V	T	D	V	D	A	X	S	S	N	Y	Q	D	V	I	Y	C	I
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.												G	G	G													T	T	.	.	T								G	G	G		S							T	T	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																													.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.											.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.			.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions