Job Description P60906 Confidence 99.90% Date Thu Jan 5 12:07:14 GMT 2012 Rank 41 Aligned Residues 171 % Identity 16% Template c3mf2B_ PDB info PDB header:ligase Chain: B: PDB Molecule:bll0957 protein; PDBTitle: crystal structure of class ii aars homologue (bll0957) complexed with2 amp Resolution 2.15 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	I	R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																											.																									.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																											.																									.	.
Template Sequence		M	G	S	D	G	V	Y	A	R	T	A	L	Y	E	S	I	V	E	R	L	A	A	L	I	T	.	S	H	R	E	A	G	T	E	A	L	R	F	P	P	V	M	S	R	A	Q	L	E	K	S	.	.	G	Y	L	K	S	F	P	N	L	L	G	C	V	C	G	L	H	G	T	E	R	E	I	N	A	A	V	S
Template Known Secondary structure					T	T																					.		T			T	T								S										T	.	.	T						T	T	T									S
Template Predicted Secondary structure																											.																									.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
																	77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	T	L	R	P	E	G	T	A	G	C	V	R	A	G	I	E	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		R	F	D	A	G	G	D	W	T	T	S	L	S	P	A	D	L	V	L	S	P	A	A	C	Y	P	V	Y	P	I	A	A	S	R	G	P	L	P	K	G	G	L	R	F	D	V	A	A	D	C	F	R	R	E	P	S	K	H	L	D	R	L	Q	S	F	R	M	R	E	Y	V	C	I	G	T	P	D	D	V	S
Template Known Secondary structure					T	T	S		G	G	G	G										S	S	S	S	T	T							T	T		S			T	T																	S	S	T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		141			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure			.	.
Query SS confidence			.	.
Query Sequence		D	.	.	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S	E	H	V	T	L	E	L	N	S	I	G	S	L	E	A	R	A	N	Y	R	D	A	L
Query Conservation			.	.
Alig confidence			.	.																		.	.
Template Conservation																						.	.
Template Sequence		D	F	R	E	R	W	M	V	R	A	Q	A	I	A	R	D	L	G	L	T	.	.	F	R	V	D	Y	A	S	D	P	F	F	G	R	V	G	Q	M	K	A	V	S
Template Known Secondary structure																		T	T			.	.
Template Predicted Secondary structure																						.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions