Job Description P60906 Confidence 99.87% Date Thu Jan 5 12:07:14 GMT 2012 Rank 44 Aligned Residues 160 % Identity 14% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	M	N	D	Y	L	P	G	E	T	A	I	W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G	C
Query Conservation
Alig confidence																																																	.	.																.
Template Conservation																																																	.	.																.
Template Sequence		G	R	S	Y	V	L	K	G	G	L	V	Q	L	Q	V	A	L	V	S	Y	S	L	D	F	L	V	K	R	G	Y	T	P	F	Y	P	P	F	F	L	N	R	D	V	M	G	E	V	.	.	A	Q	L	S	Q	F	D	E	E	L	Y	Q	V	S	G	.	D	G	D	K	K	Y	L	I	A	T	S	E	M	P	I
Template Known Secondary structure		T	T																									T	T	T								S											.	.	S								T						S	.	S	S	S						S	S	T
Template Predicted Secondary structure																																																	.	.																.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.			240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.								.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure								.																						.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence								.																						.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		V	R	A	G	I	E	.	H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	.	.	.	.	.	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	.	.	.	.	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G
Query Conservation								.																						.	.	.	.	.	.	.																						.	.	.	.
Alig confidence								.																						.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		A	A	Y	H	R	G	R	W	F	T	E	L	K	E	P	L	K	Y	A	G	M	S	T	C	F	R	K	E	A	G	A	H	G	R	D	T	L	G	I	F	R	V	H	Q	F	D	K	I	E	Q	F	V	V	C	S	P	R	Q	E	E	S	W	R	H	L	E	D	M	I	T	T	S	E	E	F	N	K	S	L	G
Template Known Secondary structure					T	T	T				S			S	S															T	T		S	S	S			S	T	T	S	S		S													S	S	T	T																					T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	E	H	V	T	L	E	L	N	S	I	G	S	L	E	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		L	P	.	.	Y	R	V	V	N	I	C	S	G	A	L	N	N
Template Known Secondary structure				.	.								T	T	T			S
Template Predicted Secondary structure				.	.
Template SS confidence
		350	.			.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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