Job Description P60906 Confidence 99.38% Date Thu Jan 5 12:07:14 GMT 2012 Rank 76 Aligned Residues 136 % Identity 18% Template c3l4gI_ PDB info PDB header:ligase Chain: I: PDB Molecule:phenylalanyl-trna synthetase alpha chain; PDBTitle: crystal structure of homo sapiens cytoplasmic phenylalanyl-trna2 synthetase Resolution 3.30 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.											.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	.	.	.	.	.	.	.	.	.	.	K	R	A	I	G	E	V	T	D	V	V	E	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	K	V	R	S	Q	F	R	Q	I	F	L	E	M	G	F	T	E	M	P	T	D	N	F	I	E	S	S	F	W	N	F	D	A	L	F	Q	P	Q	Q	H	P	A	R	D	Q	H	D	T	F	F	L	R	D	P	A	E	A	L	Q	L	P	M	D	Y	V	Q	R	V	K	R	T	H	S	Q	G	G	Y	G
Template Known Secondary structure																T	T									S								T	G	G	G	T			S	S		G	G	G	S	T	T	T	S		B		S	S	S		B		S																T		B	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
						67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.																																				.
Query SS confidence		.	.	.	.																																				.
Query Sequence		.	.	.	.	M	Y	T	F	E	D	R	N	G	D	S	L	T	L	R	P	E	G	T	A	G	C	V	R	A	G	I	E	H	G	L	L	Y	N	Q	.	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D
Query Conservation		.	.	.	.																																				.
Alig confidence		.	.	.	.																																				.
Template Conservation
Template Sequence		S	Q	G	Y	K	Y	N	W	K	L	D	E	A	R	K	N	L	L	R	T	H	T	T	S	A	S	A	R	A	L	Y	R	L	A	Q	K	K	P	F	T	P	V	K	Y	F	S	I	D	R	V	F	R	N	E	T	L	D	A	T	H	L	A	E	F	H	Q	I	E	G	V	V	A	D	H	G	L	T	L	G	H
Template Known Secondary structure		B					S								T	B							T													T	S	S	S																		S	B	T	T	B		S													S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	M	G	V	L	R	E	F	F	T	K	L	G	I	T	Q
Template Known Secondary structure		.	.											T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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