Job Description P60906 Confidence 99.04% Date Thu Jan 5 12:07:14 GMT 2012 Rank 85 Aligned Residues 142 % Identity 18% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		W	Q	R	I	E	G	T	L	K	N	V	L	G	S	Y	G	Y	S	E	I	R	L	P	I	V	E	Q	T	P	L	F	K	R	A	I	G	E	V	T	D	V	V	E	K	E	M	Y	T	F	E	D	R	N	G	.	.	.	.	.	.	.	D	S	L	T	L	R	P	E	G	T	A	G	C	V	R	A	G	I	E
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	A	T	I	Q	R	L	R	E	A	Y	L	S	I	G	F	S	E	V	V	N	P	L	I	V	E	D	V	H	V	K	K	Q	F	G	R	E	A	L	A	V	L	D	R	C	F	Y	L	A	T	L	P	K	P	N	L	K	P	I	S	S	T	L	T	L	R	S	H	M	T	T	G	W	F	I	T	L	S	H
Template Known Secondary structure															T	T	T												T								T	T	T					G	G	G	S																						S	S	T									T	T
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		H	G	L	L	Y	N	Q	E	Q	R	L	W	Y	I	G	P	M	F	R	H	E	.	R	P	Q	K	G	R	Y	R	Q	F	H	Q	L	G	C	E	V	F	G	L	Q	G	P	D	I	D	A	E	L	I	M	L	T	A	R	W	W	R	A	L	G	I	S	E	H	V	T	L	E	L	N
Query Conservation																							.
Alig confidence																							.																											.	.																	.
Template Conservation																																																		.	.																	.
Template Sequence		I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	E	D	A	T	R	L	Y	T	Y	F	S	A	S	C	V	L	V	D	E	E	L	S	V	D	D	.	.	G	K	A	V	A	E	A	L	L	R	Q	F	G	F	E	N	.	F	R	F	R	K	D
Template Known Secondary structure		T	T	T	T	S		S															T	T		T	T	T			S												S	S						.	.											T	T	T				.
Template Predicted Secondary structure																																																		.	.																	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions